RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 SENP2Q9HC62 589 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 TMEM51Q9NW97 253 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 AMACRQ9UHK6 382 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 CDHR2Q9BYE9 1310 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.96□□□□□ -0.49
HPS4-202ENST00000398145 EXOC1LA0A1B0GW35 172 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 MAPK13O15264 365 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 NMT2O60551 498 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 SASH3O75995 380 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 PRPF6O94906 941 aaKnown RBP11.96□□□□□ -0.49
HPS4-202ENST00000398145 MYCLP12524 364 aaPredicted RBP11.96□□□□□ -0.49
HPS4-202ENST00000398145 CA4P22748 312 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 BPIFB4P59827 614 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 ERVK-24P63145 666 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 KAZNQ674X7 775 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 TRAPPC11Q7Z392 1133 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 MS4A14Q96JA4 679 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 CFAP57Q96MR6 1250 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 ZIM3Q96PE6 472 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 RBM12Q9NTZ6 932 aaKnown RBP11.96□□□□□ -0.49
HPS4-202ENST00000398145 BCAP29Q9UHQ4 241 aa11.96□□□□□ -0.49
HPS4-202ENST00000398145 LOC102724428A0A0B4J2F2 783 aa11.96□□□□□ -0.5
HPS4-202ENST00000398145 TTLL1O95922 423 aa11.96□□□□□ -0.5
HPS4-202ENST00000398145 CRKLP46109 303 aaKnown RBP11.96□□□□□ -0.5
HPS4-202ENST00000398145 SIK1P57059 783 aa11.96□□□□□ -0.5
HPS4-202ENST00000398145 ZNF449Q6P9G9 518 aa11.96□□□□□ -0.5
HPS4-202ENST00000398145 IL17RAQ96F46 866 aa11.96□□□□□ -0.5
HPS4-202ENST00000398145 MPHOSPH6Q99547 160 aaKnown RBP11.96□□□□□ -0.5
HPS4-202ENST00000398145 KCNG1Q9UIX4 513 aa11.96□□□□□ -0.5
HPS4-202ENST00000398145 CCNL1Q9UK58 526 aaPredicted RBP11.96□□□□□ -0.5
HPS4-202ENST00000398145 RAB21Q9UL25 225 aa11.96□□□□□ -0.5
HPS4-202ENST00000398145 NOC2LQ9Y3T9 749 aaKnown RBP11.96□□□□□ -0.5
HPS4-202ENST00000398145 CASC4Q6P4E1 433 aa11.96□□□□□ -0.5
HPS4-202ENST00000398145 ANKZF1Q9H8Y5 726 aa11.96□□□□□ -0.5
HPS4-202ENST00000398145 SLC24A3Q9HC58 644 aa11.96□□□□□ -0.5
HPS4-202ENST00000398145 UBE2TQ9NPD8 197 aaPredicted RBP11.96□□□□□ -0.5
HPS4-202ENST00000398145 CEMIPQ8WUJ3 1361 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 PTPRUQ92729 1446 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 CARSP49589 748 aaKnown RBP11.95□□□□□ -0.5
HPS4-202ENST00000398145 SEC24CP53992 1094 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 RWDD2BP57060 319 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 BYSLQ13895 437 aaKnown RBP11.95□□□□□ -0.5
HPS4-202ENST00000398145 CPXCR1Q8N123 301 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 CHURC1Q8WUH1 139 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 TEKT1Q969V4 418 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 CCDC17Q96LX7 622 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 CDC42BPGQ6DT37 1551 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 FAM107AO95990 144 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 CYP2D6P10635 497 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 ORC2Q13416 577 aaPredicted RBP11.95□□□□□ -0.5
HPS4-202ENST00000398145 SUSD4Q5VX71 490 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 SRBD1Q8N5C6 995 aaKnown RBP11.95□□□□□ -0.5
HPS4-202ENST00000398145 RAD54LQ92698 747 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 TUBB6Q9BUF5 446 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 PARVGQ9HBI0 331 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 DCP1AQ9NPI6 582 aaPredicted RBP11.95□□□□□ -0.5
HPS4-202ENST00000398145 BARHL2Q9NY43 387 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 ELF1P32519 619 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 HDLBPQ00341 1268 aaKnown RBP11.95□□□□□ -0.5
HPS4-202ENST00000398145 COASYQ13057 564 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 SLC18A3Q16572 532 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 UBE2SQ16763 222 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 HADHQ16836 314 aaKnown RBP11.95□□□□□ -0.5
HPS4-202ENST00000398145 PIGBQ92521 554 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 TRIM11Q96F44 468 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 TMEM47Q9BQJ4 181 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 BHMT2Q9H2M3 363 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 VCX3AQ9NNX9 186 aa11.95□□□□□ -0.5
HPS4-202ENST00000398145 NEXMIFQ5QGS0 1516 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 ATP5HO75947 161 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 INHBAP08476 426 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 ZNF18P17022 549 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 SLC16A2P36021 539 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 STK4Q13043 487 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 FAM102BQ5T8I3 360 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 GIMAP8Q8ND71 665 aaPredicted RBP11.94□□□□□ -0.5
HPS4-202ENST00000398145 PPP4R1Q8TF05 950 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 MAP3K14Q99558 947 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 AZI2Q9H6S1 392 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 DNAJC17Q9NVM6 304 aaKnown RBP11.94□□□□□ -0.5
HPS4-202ENST00000398145 DNAJC12Q9UKB3 198 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 FAM187AA6NFU0 413 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 DCTN3O75935 186 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 POLR2MP0CAP2 368 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 ICA1Q05084 483 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 TRIP13Q15645 432 aaPredicted RBP11.94□□□□□ -0.5
HPS4-202ENST00000398145 LRIG3Q6UXM1 1119 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 TSC22D3Q99576 134 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 TEKT3Q9BXF9 490 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 TFR2Q9UP52 801 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 LEMD3Q9Y2U8 911 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 PDS5AQ29RF7 1337 aaKnown RBP11.94□□□□□ -0.5
HPS4-202ENST00000398145 CASQ2O14958 399 aaPredicted RBP11.94□□□□□ -0.5
HPS4-202ENST00000398145 MXI1P50539 228 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 POLE2P56282 527 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 PSMD6Q15008 389 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 DIXDC1Q155Q3 683 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 CERKLQ49MI3 558 aaPredicted RBP11.94□□□□□ -0.5
HPS4-202ENST00000398145 FAM47EQ6ZV65 393 aa11.94□□□□□ -0.5
HPS4-202ENST00000398145 CPVLQ9H3G5 476 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms