RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 POTEEQ6S8J3 1075 aa20.69■□□□□ 0.9
CBX1-202ENST00000393408 MREGQ8N565 214 aa20.69■□□□□ 0.9
CBX1-202ENST00000393408 KRT12Q99456 494 aa20.69■□□□□ 0.9
CBX1-202ENST00000393408 HDAC9Q9UKV0 1011 aa20.69■□□□□ 0.9
CBX1-202ENST00000393408 ADAMTSL1Q8N6G6 1762 aa20.69■□□□□ 0.9
CBX1-202ENST00000393408 IRF2BP2Q7Z5L9 587 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 CASKIN2Q8WXE0 1202 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 CCDC43Q96MW1 224 aaKnown RBP20.68■□□□□ 0.9
CBX1-202ENST00000393408 CRAMP1Q96RY5 1269 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 PLCB1Q9NQ66 1216 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 UBR3Q6ZT12 1888 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 ACTN1P12814 892 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 PTK2Q05397 1052 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 SPIRE1Q08AE8 756 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 CDC37Q16543 378 aaPredicted RBP20.68■□□□□ 0.9
CBX1-202ENST00000393408 C10orf76Q5T2E6 689 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 FRMD5Q7Z6J6 570 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 SLFN12Q8IYM2 578 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 USP38Q8NB14 1042 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 IFT81Q8WYA0 676 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 ZHX3Q9H4I2 956 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 TRAF3IP3Q9Y228 551 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 PCDHA1Q9Y5I3 950 aa20.68■□□□□ 0.9
CBX1-202ENST00000393408 CES2O00748 559 aa20.67■□□□□ 0.9
CBX1-202ENST00000393408 RIMBP2O15034 1052 aa20.67■□□□□ 0.9
CBX1-202ENST00000393408 CCT5P48643 541 aa20.67■□□□□ 0.9
CBX1-202ENST00000393408 CFAP58Q5T655 872 aa20.67■□□□□ 0.9
CBX1-202ENST00000393408 MOXD1Q6UVY6 613 aa20.67■□□□□ 0.9
CBX1-202ENST00000393408 COA1Q9GZY4 146 aa20.67■□□□□ 0.9
CBX1-202ENST00000393408 LRRC4BQ9NT99 713 aa20.67■□□□□ 0.9
CBX1-202ENST00000393408 TMEM59LQ9UK28 342 aa20.67■□□□□ 0.9
CBX1-202ENST00000393408 MYBP10242 640 aa20.67■□□□□ 0.9
CBX1-202ENST00000393408 SLC9A1P19634 815 aa20.67■□□□□ 0.9
CBX1-202ENST00000393408 GIT2Q14161 759 aa20.67■□□□□ 0.9
CBX1-202ENST00000393408 SKIDA1Q1XH10 827 aa20.67■□□□□ 0.9
CBX1-202ENST00000393408 ZNF571Q7Z3V5 609 aaPredicted RBP20.67■□□□□ 0.9
CBX1-202ENST00000393408 ETNPPLQ8TBG4 499 aa20.67■□□□□ 0.9
CBX1-202ENST00000393408 CRYGNQ8WXF5 182 aa20.67■□□□□ 0.9
CBX1-202ENST00000393408 ZNF233A6NK53 670 aa20.66■□□□□ 0.9
CBX1-202ENST00000393408 HOXD13P35453 343 aa20.66■□□□□ 0.9
CBX1-202ENST00000393408 CDC42EP5Q6NZY7 148 aa20.66■□□□□ 0.9
CBX1-202ENST00000393408 EPM2AIP1Q7L775 607 aaPredicted RBP20.66■□□□□ 0.9
CBX1-202ENST00000393408 CATSPER3Q86XQ3 398 aa20.66■□□□□ 0.9
CBX1-202ENST00000393408 BCAS4Q8TDM0 211 aa20.66■□□□□ 0.9
CBX1-202ENST00000393408 PIK3R5Q8WYR1 880 aa20.66■□□□□ 0.9
CBX1-202ENST00000393408 ARMCX3Q9UH62 379 aaPredicted RBP20.66■□□□□ 0.9
CBX1-202ENST00000393408 KRT14P02533 472 aa20.66■□□□□ 0.9
CBX1-202ENST00000393408 HLA-DOAP06340 250 aa20.66■□□□□ 0.9
CBX1-202ENST00000393408 SLURP2P0DP57 97 aa20.66■□□□□ 0.9
CBX1-202ENST00000393408 UCHL3P15374 230 aa20.66■□□□□ 0.9
CBX1-202ENST00000393408 PSMC6P62333 389 aa20.66■□□□□ 0.9
CBX1-202ENST00000393408 TNNC1P63316 161 aa20.66■□□□□ 0.9
CBX1-202ENST00000393408 KNOP1Q1ED39 458 aaKnown RBP20.66■□□□□ 0.9
CBX1-202ENST00000393408 EFCAB13Q8IY85 973 aa20.66■□□□□ 0.9
CBX1-202ENST00000393408 A6NNZ2 444 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 MEIS2O14770 477 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 RAD51CO43502 376 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 AFPP02771 609 aaKnown RBP20.65■□□□□ 0.9
CBX1-202ENST00000393408 RNASE9P60153 205 aaKnown RBP20.65■□□□□ 0.9
CBX1-202ENST00000393408 RPS6KA1Q15418 735 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 TUBB8Q3ZCM7 444 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 CD302Q8IX05 232 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 WHAMMQ8TF30 809 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 PPM1EQ8WY54 764 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 TAF4BQ92750 862 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 P2RX7Q99572 595 aaKnown RBP20.65■□□□□ 0.9
CBX1-202ENST00000393408 MXD3Q9BW11 206 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 BZW2Q9Y6E2 419 aaKnown RBP20.65■□□□□ 0.9
CBX1-202ENST00000393408 PON1P27169 355 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 GUCY2FP51841 1108 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 AP3B2Q13367 1082 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 TTC19Q6DKK2 380 aaPredicted RBP20.65■□□□□ 0.9
CBX1-202ENST00000393408 SFR1Q86XK3 245 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 SP8Q8IXZ3 490 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 SH2D3CQ8N5H7 860 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 SYT2Q8N9I0 419 aaPredicted RBP20.65■□□□□ 0.9
CBX1-202ENST00000393408 CCDC17Q96LX7 622 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 SPAG5Q96R06 1193 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 REEP2Q9BRK0 252 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 FAM107BQ9H098 131 aa20.65■□□□□ 0.9
CBX1-202ENST00000393408 EBAG9O00559 213 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 KIF4AO95239 1232 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 SPATA31C1P0DKV0 1188 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 SCNN1DP51172 638 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 ARHGAP4P98171 946 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 TRADDQ15628 312 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 SHTN1A0MZ66 631 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 RPA1P27694 616 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 PABPC4Q13310 644 aaKnown RBP eCLIP20.64■□□□□ 0.894e-9■■■■■ 26.8
CBX1-202ENST00000393408 EXOC3L4Q17RC7 722 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 KCTD16Q68DU8 428 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 LRRC57Q8N9N7 239 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 ERMNQ8TAM6 284 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 DCAF4Q8WV16 495 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 DNAJC18Q9H819 358 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 NAGPAQ9UK23 515 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 SIPA1L1O43166 1804 aa20.64■□□□□ 0.89
CBX1-202ENST00000393408 MEIS1O00470 390 aa20.63■□□□□ 0.89
CBX1-202ENST00000393408 PDXKO00764 312 aa20.63■□□□□ 0.89
CBX1-202ENST00000393408 KCNK3O14649 394 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms