RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 REEP2Q9BRK0 252 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 GLT8D2Q9H1C3 349 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 AIPL1Q9NZN9 384 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 FEZ2Q9UHY8 353 aaPredicted RBP13.37□□□□□ -0.27
RFC3-201ENST00000380071 HDAC9Q9UKV0 1011 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 PITPNM2Q9BZ72 1349 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 GOLGA6BA6NDN3 693 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 RSPH10B2B2RC85 870 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 F5H6K3 240 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 RSPH10BP0C881 870 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 MYBP10242 640 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 EPS15P42566 896 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 RNASE9P60153 205 aaKnown RBP13.37□□□□□ -0.27
RFC3-201ENST00000380071 KLRC3Q07444 240 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 KIAA0753Q2KHM9 967 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 DPY19L2P1Q6NXN4 242 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 SLC30A10Q6XR72 485 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 SFR1Q86XK3 245 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 ZDHHC15Q96MV8 337 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 STIM2Q9P246 746 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 PI4KBQ9UBF8 816 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 DNM3Q9UQ16 869 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 ANKRD31Q8N7Z5 1873 aa13.36□□□□□ -0.27
RFC3-201ENST00000380071 AFF2P51816 1311 aa13.36□□□□□ -0.27
RFC3-201ENST00000380071 JAG1P78504 1218 aa13.36□□□□□ -0.27
RFC3-201ENST00000380071 CYP4A11Q02928 519 aa13.36□□□□□ -0.27
RFC3-201ENST00000380071 EDRF1Q3B7T1 1238 aa13.36□□□□□ -0.27
RFC3-201ENST00000380071 GOLGA6L1Q8N7Z2 621 aa13.36□□□□□ -0.27
RFC3-201ENST00000380071 SYT2Q8N9I0 419 aaPredicted RBP13.36□□□□□ -0.27
RFC3-201ENST00000380071 TSEN2Q8NCE0 465 aaKnown RBP13.36□□□□□ -0.27
RFC3-201ENST00000380071 CWC15Q9P013 229 aaKnown RBP13.36□□□□□ -0.27
RFC3-201ENST00000380071 SIPA1L1O43166 1804 aa13.36□□□□□ -0.27
RFC3-201ENST00000380071 RPS6KA5O75582 802 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 GLI1P08151 1106 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 NPR1P16066 1061 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 RPA1P27694 616 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 HOXA13P31271 388 aaPredicted RBP13.35□□□□□ -0.27
RFC3-201ENST00000380071 ICA1Q05084 483 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 AP3B2Q13367 1082 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 ASIC2Q16515 512 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 KNOP1Q1ED39 458 aaKnown RBP13.35□□□□□ -0.27
RFC3-201ENST00000380071 CFAP221Q4G0U5 840 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 C8orf74Q6P047 294 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 AMNQ9BXJ7 453 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 SPATA31A6Q5VVP1 1343 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 ZSCAN5CA6NGD5 496 aaPredicted RBP13.35□□□□□ -0.27
RFC3-201ENST00000380071 TRIM66O15016 1216 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 POLD1P28340 1107 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 PTK2Q05397 1052 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 KCNA1Q09470 495 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 IKQ13123 557 aaPredicted RBP13.35□□□□□ -0.27
RFC3-201ENST00000380071 Q4G0T1 1027 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 MEI1Q5TIA1 1274 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 MOXD1Q6UVY6 613 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 EPM2AIP1Q7L775 607 aaPredicted RBP13.35□□□□□ -0.27
RFC3-201ENST00000380071 ZNF571Q7Z3V5 609 aaPredicted RBP13.35□□□□□ -0.27
RFC3-201ENST00000380071 IRF2BP2Q7Z5L9 587 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 TRAF3IP3Q9Y228 551 aa13.35□□□□□ -0.27
RFC3-201ENST00000380071 SFI1A8K8P3 1242 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 OPLAHO14841 1288 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 MSH4O15457 936 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 AKAP3O75969 853 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 NDUFB10O96000 172 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 CASP4P49662 377 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 TATDN1Q6P1N9 297 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 PPP4R3CPQ6ZMV5 832 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 FBXO11Q86XK2 927 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 BHMT2Q9H2M3 363 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 IKZF4Q9H2S9 585 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 RGL1Q9NZL6 768 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 ARMCX3Q9UH62 379 aaPredicted RBP13.34□□□□□ -0.27
RFC3-201ENST00000380071 TSKSQ9UJT2 592 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 PCDHGC5Q9Y5F6 944 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 ESYT3A0FGR9 886 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 GRID2IPA4D2P6 1211 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 SPDYE3A6NKU9 549 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 MYO1CO00159 1063 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 EML1O00423 815 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 CLIC2O15247 247 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 UCHL3P15374 230 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 PON1P27169 355 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 ALDH1B1P30837 517 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 CARSP49589 748 aaKnown RBP13.34□□□□□ -0.27
RFC3-201ENST00000380071 SKIDA1Q1XH10 827 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 FRMD5Q7Z6J6 570 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 RUSC1Q9BVN2 902 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 GOLPH3Q9H4A6 298 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 SMCHD1A6NHR9 2005 aa13.34□□□□□ -0.27
RFC3-201ENST00000380071 SLC26A4O43511 780 aa13.33□□□□□ -0.27
RFC3-201ENST00000380071 AFPP02771 609 aaKnown RBP13.33□□□□□ -0.27
RFC3-201ENST00000380071 IVLP07476 585 aa13.33□□□□□ -0.27
RFC3-201ENST00000380071 SREBF1P36956 1147 aa13.33□□□□□ -0.27
RFC3-201ENST00000380071 EPHB4P54760 987 aa13.33□□□□□ -0.27
RFC3-201ENST00000380071 RRP1BQ14684 758 aaKnown RBP13.33□□□□□ -0.27
RFC3-201ENST00000380071 DCAF17Q5H9S7 520 aaPredicted RBP13.33□□□□□ -0.27
RFC3-201ENST00000380071 PODNQ7Z5L7 613 aa13.33□□□□□ -0.27
RFC3-201ENST00000380071 SRLQ86TD4 932 aa13.33□□□□□ -0.27
RFC3-201ENST00000380071 ERMNQ8TAM6 284 aa13.33□□□□□ -0.27
RFC3-201ENST00000380071 RBM46Q8TBY0 533 aaKnown RBP13.33□□□□□ -0.27
RFC3-201ENST00000380071 ZNF622Q969S3 477 aaKnown RBP eCLIP13.33□□□□□ -0.273e-7■□□□□ 10.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms