RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 KCNK3O14649 394 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 MDH1P40925 334 aaKnown RBP15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 CDK8P49336 464 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 ERVK-9P63128 1117 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 AOC3Q16853 763 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 TMEM266Q2M3C6 531 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 ZCWPW2Q504Y3 356 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 KRT79Q5XKE5 535 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 SPTY2D1Q68D10 685 aaPredicted RBP15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 NLRP14Q86W24 1093 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 CNPY4Q8N129 248 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 MREGQ8N565 214 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 TTLL6Q8N841 843 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 USP38Q8NB14 1042 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 DNAJC19Q96DA6 116 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 CEP95Q96GE4 821 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 COA1Q9GZY4 146 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 YY1AP1Q9H869 796 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 RIC8AQ9NPQ8 531 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 PCDHGC5Q9Y5F6 944 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 NPHP3-ACAD11A0A0J9YXS1 232 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 A6NNZ2 444 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 G3V3G9 751 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 KLHL30Q0D2K2 578 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 ITGB3BPQ13352 177 aaPredicted RBP15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 TUBB8Q3ZCM7 444 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 DCAF8Q5TAQ9 597 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 CD302Q8IX05 232 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 PRPF38AQ8NAV1 312 aaKnown RBP15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 CEP89Q96ST8 783 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 MTFR1LQ9H019 292 aa15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 PPANQ9NQ55 473 aaKnown RBP15.49■□□□□ 0.07
CLCNKA-202ENST00000375692 E7EVH7 732 aa15.48■□□□□ 0.07
CLCNKA-202ENST00000375692 IFT88Q13099 833 aa15.48■□□□□ 0.07
CLCNKA-202ENST00000375692 SWT1Q5T5J6 900 aaKnown RBP15.48■□□□□ 0.07
CLCNKA-202ENST00000375692 GPATCH11Q8N954 259 aa15.48■□□□□ 0.07
CLCNKA-202ENST00000375692 MYCBPAPQ8TBZ2 947 aa15.48■□□□□ 0.07
CLCNKA-202ENST00000375692 AP1M1Q9BXS5 423 aa15.48■□□□□ 0.07
CLCNKA-202ENST00000375692 PANK4Q9NVE7 773 aa15.48■□□□□ 0.07
CLCNKA-202ENST00000375692 LOC102724159A0A0B4J2E5 919 aa15.48■□□□□ 0.07
CLCNKA-202ENST00000375692 ACTN1P12814 892 aa15.48■□□□□ 0.07
CLCNKA-202ENST00000375692 TNNI2P48788 182 aa15.48■□□□□ 0.07
CLCNKA-202ENST00000375692 PWP2Q15269 919 aaKnown RBP15.48■□□□□ 0.07
CLCNKA-202ENST00000375692 WHAMMQ8TF30 809 aa15.48■□□□□ 0.07
CLCNKA-202ENST00000375692 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.48■□□□□ 0.07
CLCNKA-202ENST00000375692 ROBO3Q96MS0 1386 aa15.48■□□□□ 0.07
CLCNKA-202ENST00000375692 BAG3O95817 575 aa15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 HSD17B3P37058 310 aa15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 PSMD2Q13200 908 aa15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 UBE2SQ16763 222 aa15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 TMEM119Q4V9L6 283 aa15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 FAM26FQ5R3K3 315 aa15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 SYN2Q92777 582 aaPredicted RBP15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 CEP104O60308 925 aa15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 ECHS1P30084 290 aa15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 HSPA9P38646 679 aaKnown RBP15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 RPS6KA1Q15418 735 aa15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 EMC10Q5UCC4 262 aa15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 TAF4BQ92750 862 aa15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 NEUROG2Q9H2A3 272 aa15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 TAF1DQ9H5J8 278 aaPredicted RBP15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 TMBIM4Q9HC24 238 aa15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 LUC7LQ9NQ29 371 aaKnown RBP15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 BCCIPQ9P287 314 aaKnown RBP eCLIP15.47■□□□□ 0.07
CLCNKA-202ENST00000375692 E9PMD0 336 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 BACH1O14867 736 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 FSBPO95073 299 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 SCNN1DP51172 638 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 TNNC1P63316 161 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 PTK2Q05397 1052 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 PDIA5Q14554 519 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 UAP1Q16222 522 aaPredicted RBP15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 ASIC2Q16515 512 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 TRIM59Q8IWR1 403 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 NEDD1Q8NHV4 660 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 NCAPGQ9BPX3 1015 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 NUCKS1Q9H1E3 243 aaKnown RBP15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 HMGB1P1B2RPK0 211 aaPredicted RBP15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 MYBP10242 640 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 TMOD1P28289 359 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 POLD1P28340 1107 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 FLT3P36888 993 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 ADCY7P51828 1080 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 RAB34Q9BZG1 259 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 TMEM59LQ9UK28 342 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 CCDC88AQ3V6T2 1871 aa15.46■□□□□ 0.07
CLCNKA-202ENST00000375692 EIF6P56537 245 aaKnown RBP15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 ZNF571Q7Z3V5 609 aaPredicted RBP15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 HAS1Q92839 578 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 DDX47Q9H0S4 455 aaKnown RBP15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 ISCUQ9H1K1 167 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 GEMIN8Q9NWZ8 242 aaKnown RBP15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 SNED1Q8TER0 1413 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 H0YGN5 161 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 MARCH6O60337 910 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 ECE2O60344 883 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 FAM107AO95990 144 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 SLC9A1P19634 815 aa15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 HERC4Q5GLZ8 1057 aaPredicted RBP15.45■□□□□ 0.06
CLCNKA-202ENST00000375692 MICALCLQ6ZW33 695 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms