RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 GBP7Q8N8V2 638 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-203ENST00000375274 BANK1Q8NDB2 785 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 MMS19Q96T76 1030 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 FUCA2Q9BTY2 467 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 MRPL47Q9HD33 250 aaKnown RBP12.47□□□□□ -0.41
PTCH1-203ENST00000375274 MIF4GDA9UHW6 222 aaKnown RBP12.47□□□□□ -0.41
PTCH1-203ENST00000375274 H7C0C1 242 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 ATP5OP48047 213 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 YARSP54577 528 aaKnown RBP12.47□□□□□ -0.41
PTCH1-203ENST00000375274 KCNQ4P56696 695 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 RWDD2BP57060 319 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 MAGOHP61326 146 aaKnown RBP12.47□□□□□ -0.41
PTCH1-203ENST00000375274 SRLQ86TD4 932 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 SLC44A5Q8NCS7 719 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 CFAP57Q96MR6 1250 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 CSRNP1Q96S65 589 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 L2HGDHQ9H9P8 463 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 SUGCTQ9HAC7 445 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 DNAJC12Q9UKB3 198 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 FAM205CA6NFA0 338 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 CA4P22748 312 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 SLC12A2P55011 1212 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 CLEC4GQ6UXB4 293 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 MIS12Q9H081 205 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 TXLNGQ9NUQ3 528 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 SNX12Q9UMY4 172 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 PNPLA7Q6ZV29 1317 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 GMNCA6NCL1 334 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 SFI1A8K8P3 1242 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 OPHN1O60890 802 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 GDF11O95390 407 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 ANTXR2P58335 489 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 CDC37Q16543 378 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-203ENST00000375274 CCDC125Q86Z20 511 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 GDAP1Q8TB36 358 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 N4BP2L2Q92802 583 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-203ENST00000375274 ATP6V0A1Q93050 837 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 HOOK2Q96ED9 719 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 TAF1DQ9H5J8 278 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-203ENST00000375274 DNAJC17Q9NVM6 304 aaKnown RBP12.47□□□□□ -0.41
PTCH1-203ENST00000375274 BARHL2Q9NY43 387 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 MINPP1Q9UNW1 487 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 E9PMD0 336 aa12.46□□□□□ -0.41
PTCH1-203ENST00000375274 ARHGAP4P98171 946 aa12.46□□□□□ -0.41
PTCH1-203ENST00000375274 MAP7D3Q8IWC1 876 aa12.46□□□□□ -0.41
PTCH1-203ENST00000375274 FAM81BQ96LP2 452 aa12.46□□□□□ -0.41
PTCH1-203ENST00000375274 EDEM3Q9BZQ6 932 aa12.46□□□□□ -0.41
PTCH1-203ENST00000375274 VIPAS39Q9H9C1 493 aa12.46□□□□□ -0.41
PTCH1-203ENST00000375274 NPHP4O75161 1426 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-203ENST00000375274 CDC42BPGQ6DT37 1551 aa12.46□□□□□ -0.41
PTCH1-203ENST00000375274 KIF3CO14782 793 aa12.46□□□□□ -0.41
PTCH1-203ENST00000375274 FCER1AP12319 257 aa12.46□□□□□ -0.41
PTCH1-203ENST00000375274 MRPS9P82933 396 aaKnown RBP12.46□□□□□ -0.41
PTCH1-203ENST00000375274 COASYQ13057 564 aa12.46□□□□□ -0.41
PTCH1-203ENST00000375274 PDCD7Q8N8D1 485 aaKnown RBP12.46□□□□□ -0.41
PTCH1-203ENST00000375274 SH3RF3Q8TEJ3 882 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-203ENST00000375274 RAD54LQ92698 747 aa12.46□□□□□ -0.41
PTCH1-203ENST00000375274 KMT5AQ9NQR1 393 aa12.46□□□□□ -0.41
PTCH1-203ENST00000375274 DIS3Q9Y2L1 958 aaKnown RBP12.46□□□□□ -0.41
PTCH1-203ENST00000375274 SYNGAP1Q96PV0 1343 aa12.46□□□□□ -0.41
PTCH1-203ENST00000375274 PXDNLA1KZ92 1463 aa12.46□□□□□ -0.41
PTCH1-203ENST00000375274 ECM2O94769 699 aaPredicted RBP12.46□□□□□ -0.42
PTCH1-203ENST00000375274 TMED8Q6PL24 325 aaPredicted RBP12.46□□□□□ -0.42
PTCH1-203ENST00000375274 SFR1Q86XK3 245 aa12.46□□□□□ -0.42
PTCH1-203ENST00000375274 LRRC1Q9BTT6 524 aa12.46□□□□□ -0.42
PTCH1-203ENST00000375274 TRIM9Q9C026 710 aa12.46□□□□□ -0.42
PTCH1-203ENST00000375274 DHX36Q9H2U1 1008 aaKnown RBP12.46□□□□□ -0.42
PTCH1-203ENST00000375274 HESX1Q9UBX0 185 aa12.46□□□□□ -0.42
PTCH1-203ENST00000375274 PNMA2Q9UL42 364 aa12.46□□□□□ -0.42
PTCH1-203ENST00000375274 ITIH6Q6UXX5 1313 aa12.46□□□□□ -0.42
PTCH1-203ENST00000375274 TNFAIP1Q13829 316 aa12.46□□□□□ -0.42
PTCH1-203ENST00000375274 RCN2Q14257 317 aa12.46□□□□□ -0.42
PTCH1-203ENST00000375274 RPUSD2Q8IZ73 545 aaKnown RBP12.46□□□□□ -0.42
PTCH1-203ENST00000375274 CCSER1Q9C0I3 900 aa12.46□□□□□ -0.42
PTCH1-203ENST00000375274 PACSIN2Q9UNF0 486 aaPredicted RBP12.46□□□□□ -0.42
PTCH1-203ENST00000375274 MROH7-TTC4A0A0A0MT08 1334 aa12.46□□□□□ -0.42
PTCH1-203ENST00000375274 USP17L5A8MUK1 530 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 SORBS3O60504 671 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 NR3C1P04150 777 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 MSH2P43246 934 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 MAP7Q14244 749 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 CTTNQ14247 550 aaKnown RBP12.45□□□□□ -0.42
PTCH1-203ENST00000375274 NBPF9Q3BBW0 867 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 BRDTQ58F21 947 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-203ENST00000375274 ANKRD40Q6AI12 368 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 ADSSL1Q8N142 457 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 PROCA1Q8NCQ7 364 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-203ENST00000375274 ATP6V1G3Q96LB4 118 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 TACC3Q9Y6A5 838 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 GRID2IPA4D2P6 1211 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 PPP2R2AP63151 447 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 DPYDQ12882 1025 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 ORC2Q13416 577 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-203ENST00000375274 GRM4Q14833 912 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 SYDE2Q5VT97 1194 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 SRBD1Q8N5C6 995 aaKnown RBP12.45□□□□□ -0.42
PTCH1-203ENST00000375274 KCNB2Q92953 911 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 PI4KBQ9UBF8 816 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 PRKG1Q13976 671 aa12.45□□□□□ -0.42
PTCH1-203ENST00000375274 TAF11Q15544 211 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms