RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 SALL4Q9UJQ4 1053 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 PNMA2Q9UL42 364 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 TTC7AQ9ULT0 858 aaPredicted RBP8.37□□□□□ -1.07
CCR9-201ENST00000355983 SIK3Q9Y2K2 1263 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 METP08581 1390 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 A8MUI8 341 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 DCDC2CA8MYV0 355 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 ATP6V1G1O75348 118 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 TRAPPC10P48553 1259 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 ALX1Q15699 326 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 ENOX2Q16206 610 aaKnown RBP8.37□□□□□ -1.07
CCR9-201ENST00000355983 CNGA2Q16280 664 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 MIIPQ5JXC2 388 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 RNF220Q5VTB9 566 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 ZNF365Q70YC5 407 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 RNF168Q8IYW5 571 aaPredicted RBP8.37□□□□□ -1.07
CCR9-201ENST00000355983 RASGEF1CQ8N431 466 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 GIMAP8Q8ND71 665 aaPredicted RBP8.37□□□□□ -1.07
CCR9-201ENST00000355983 MDM1Q8TC05 714 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 TAF4BQ92750 862 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 NAP1L3Q99457 506 aaPredicted RBP8.37□□□□□ -1.07
CCR9-201ENST00000355983 MAGEF1Q9HAY2 307 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 DDX43Q9NXZ2 648 aaKnown RBP8.37□□□□□ -1.07
CCR9-201ENST00000355983 NKX1-2Q9UD57 310 aaPredicted RBP8.37□□□□□ -1.07
CCR9-201ENST00000355983 DDX25Q9UHL0 483 aaKnown RBP8.37□□□□□ -1.07
CCR9-201ENST00000355983 DAAM1Q9Y4D1 1078 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.37□□□□□ -1.07
CCR9-201ENST00000355983 BACH1O14867 736 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 NVLO15381 856 aaKnown RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 TJP3O95049 919 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 FAM200BP0CF97 657 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 CCNE1P24864 410 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 PTDSS1P48651 473 aaKnown RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 PHEXP78562 749 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 DAB2IPQ5VWQ8 1189 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 ALDH16A1Q8IZ83 802 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 UTP4Q969X6 686 aaKnown RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 OLFM3Q96PB7 478 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 GBP5Q96PP8 586 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 METTL22Q9BUU2 404 aaPredicted RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 SPATA16Q9BXB7 569 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 ROPN1BQ9BZX4 212 aaPredicted RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 DPH5Q9H2P9 285 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 PABPC3Q9H361 631 aaKnown RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 EPB41L1Q9H4G0 881 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 ROPN1Q9HAT0 212 aaPredicted RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 G3BP2Q9UN86 482 aaKnown RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 WNK3Q9BYP7 1800 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 E2F6O75461 281 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 IFIT1P09914 478 aaKnown RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 ZBTB48P10074 688 aaPredicted RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 PIM1P11309 404 aaPredicted RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 XBP1P17861 261 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 RASSF2P50749 326 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 USP11P51784 963 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 DHX9Q08211 1270 aaKnown RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 TRADDQ15628 312 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 CLUL1Q15846 466 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 ARL6IP4Q66PJ3 421 aaKnown RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 TYW1BQ6NUM6 668 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 CYB5R4Q7L1T6 521 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 SYCP3Q8IZU3 236 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 RSPH1Q8WYR4 309 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 TRIM47Q96LD4 638 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 MTRQ99707 1265 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 DUSP9Q99956 384 aaKnown RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 UBAC1Q9BSL1 405 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 NEUROG2Q9H2A3 272 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 PCDH18Q9HCL0 1135 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 PREBQ9HCU5 417 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 CCDC87Q9NVE4 849 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 NDUFA13Q9P0J0 144 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 SUN2Q9UH99 717 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 NDUFB9Q9Y6M9 179 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 PKD1L3Q7Z443 1732 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 PGRMC1O00264 195 aaKnown RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 PALMO75781 387 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 CIAO1O76071 339 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 CPA3P15088 417 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 CASP1P29466 404 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 LONP1P36776 959 aaKnown RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 IL15P40933 162 aaPredicted RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 PSMD7P51665 324 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 CACNA2D1P54289 1103 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 AKAP4Q5JQC9 854 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 RBM26Q5T8P6 1007 aaKnown RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 PDXDC1Q6P996 788 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 C2CD5Q86YS7 1000 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 CRACR2BQ8N4Y2 399 aaPredicted RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 ZBTB8BQ8NAP8 495 aaPredicted RBP8.36□□□□□ -1.07
CCR9-201ENST00000355983 DYDC1Q8WWB3 177 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 RMDN2Q96LZ7 410 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCR9-201ENST00000355983 EPB41L4BQ9H329 900 aa8.36□□□□□ -1.07
CCR9-201ENST00000355983 KIF13BQ9NQT8 1826 aa8.35□□□□□ -1.07
CCR9-201ENST00000355983 BTBD11A6QL63 1104 aa8.35□□□□□ -1.07
CCR9-201ENST00000355983 RGS16O15492 202 aaPredicted RBP8.35□□□□□ -1.07
CCR9-201ENST00000355983 STRNO43815 780 aa8.35□□□□□ -1.07
CCR9-201ENST00000355983 ATP9BO43861 1147 aa8.35□□□□□ -1.07
CCR9-201ENST00000355983 OATP04181 439 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms