RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 PHKA2P46019 1235 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 BPIFB4P59827 614 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 CD209Q9NNX6 404 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 STAM2O75886 525 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 GH2P01242 217 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 PLCG1P19174 1290 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 TWF2Q6IBS0 349 aaKnown RBP11.82□□□□□ -0.52
CLCN6-202ENST00000346436 CCDC84Q86UT8 332 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-202ENST00000346436 TRIM58Q8NG06 486 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 PANX2Q96RD6 677 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 PIGSQ96S52 555 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 RWDD2AQ9UIY3 292 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 KCNK3O14649 394 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 ABCB4P21439 1286 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 ZNF365Q70YC5 407 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 DEFB132Q7Z7B7 95 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 MYOCDQ8IZQ8 938 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 NUCKS1Q9H1E3 243 aaKnown RBP11.81□□□□□ -0.52
CLCN6-202ENST00000346436 ADARB2Q9NS39 739 aaKnown RBP11.81□□□□□ -0.52
CLCN6-202ENST00000346436 MAP3K20Q9NYL2 800 aaKnown RBP11.81□□□□□ -0.52
CLCN6-202ENST00000346436 DPEP1P16444 411 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 GAP43P17677 238 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 SLC16A2P36021 539 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 ITIH3Q06033 890 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 TKFCQ3LXA3 575 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 TBCKQ8TEA7 893 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 LRRC4Q9HBW1 653 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 RNF40O75150 1001 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 GPSM2P81274 684 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 ARHGAP44Q17R89 818 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 TBC1D9BQ66K14 1250 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 MB21D1Q8N884 522 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 SLC44A5Q8NCS7 719 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 IGDCC4Q8TDY8 1250 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 KMT5AQ9NQR1 393 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 PXDNQ92626 1479 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 EHHADHQ08426 723 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 P2RX5Q93086 422 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 NHEJ1Q9H9Q4 299 aaPredicted RBP11.81□□□□□ -0.52
CLCN6-202ENST00000346436 METTL14Q9HCE5 456 aaKnown RBP11.81□□□□□ -0.52
CLCN6-202ENST00000346436 PANK4Q9NVE7 773 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 ANAPC4Q9UJX5 808 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 FBXO2Q9UK22 296 aaPredicted RBP11.81□□□□□ -0.52
CLCN6-202ENST00000346436 MORC2Q9Y6X9 1032 aaPredicted RBP11.81□□□□□ -0.52
CLCN6-202ENST00000346436 SPATA31A5Q5VU36 1347 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 SPATA31A7Q8IWB4 1347 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 PRCPP42785 496 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 RPS6KA1Q15418 735 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 PALM2Q8IXS6 379 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 GLT1D1Q96MS3 346 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 PPANQ9NQ55 473 aaKnown RBP11.81□□□□□ -0.52
CLCN6-202ENST00000346436 GGA3Q9NZ52 723 aa11.81□□□□□ -0.52
CLCN6-202ENST00000346436 ABCB11O95342 1321 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 DIP2BQ9P265 1576 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 CTIFO43310 598 aaKnown RBP11.8□□□□□ -0.52
CLCN6-202ENST00000346436 ZBTB16Q05516 673 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 MAP7Q14244 749 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 STRIP1Q5VSL9 837 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 KCTD1Q719H9 257 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 INPP5FQ9Y2H2 1132 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 TRAPPC3O43617 180 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 PSMC4P43686 418 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 CYP4A11Q02928 519 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 PRPSAP1Q14558 356 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 CASP8Q14790 479 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 TMTC3Q6ZXV5 915 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 GBA2Q9HCG7 927 aaPredicted RBP11.8□□□□□ -0.52
CLCN6-202ENST00000346436 ABHD10Q9NUJ1 306 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 HYOU1Q9Y4L1 999 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 CCDC151A5D8V7 595 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 EPHX2P34913 555 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 STAT3P40763 770 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 GUCY2DQ02846 1103 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 LGSNQ5TDP6 509 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 NAA35Q5VZE5 725 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 EPB41L4AQ9HCS5 686 aaPredicted RBP11.8□□□□□ -0.52
CLCN6-202ENST00000346436 RNF146Q9NTX7 359 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 INPP5BP32019 993 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 RGS2P41220 211 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 U2AF1L4Q8WU68 220 aaKnown RBP11.8□□□□□ -0.52
CLCN6-202ENST00000346436 CTTNBP2NLQ9P2B4 639 aa11.8□□□□□ -0.52
CLCN6-202ENST00000346436 MYO5BQ9ULV0 1848 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 LAD1O00515 517 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 ZBTB22O15209 634 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 SLC25A27O95847 323 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 CCT5P48643 541 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 LIG3P49916 1009 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 PGBD4Q96DM1 585 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 GCOM2Q9BZD3 368 aaPredicted RBP11.79□□□□□ -0.52
CLCN6-202ENST00000346436 RPF1Q9H9Y2 349 aaKnown RBP11.79□□□□□ -0.52
CLCN6-202ENST00000346436 KCNK9Q9NPC2 374 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 ANAPC5Q9UJX4 755 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 ADGRG1Q9Y653 693 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 FTCDO95954 541 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 PIK3CAP42336 1068 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 KRT33BQ14525 404 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 MTERF2Q49AM1 385 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 PEX26Q7Z412 305 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 SIX6OS1Q8N1H7 587 aa11.79□□□□□ -0.52
CLCN6-202ENST00000346436 FAM71BQ8TC56 605 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms