RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 ARL10Q8N8L6 244 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 GCNT4Q9P109 453 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 SNX12Q9UMY4 172 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 MAGI2Q86UL8 1455 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 SNRPA1P09661 255 aaKnown RBP14.64□□□□□ -0.07
TRIO-202ENST00000344204 AGTP01019 485 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 PTGDRQ13258 359 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 CYTH1Q15438 398 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 LMBR1LQ6UX01 489 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 CADPS2Q86UW7 1296 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 ANKFY1Q9P2R3 1169 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 NELFCDQ8IXH7 590 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 MYOM2P54296 1465 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 LRRC1Q9BTT6 524 aa14.64□□□□□ -0.07
TRIO-202ENST00000344204 ESCO1Q5FWF5 840 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 REXO1Q8N1G1 1221 aaKnown RBP14.63□□□□□ -0.07
TRIO-202ENST00000344204 SSH3Q8TE77 659 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 WDR93Q6P2C0 686 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 CENPUQ71F23 418 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 FLCNQ8NFG4 579 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 TRAPPC9Q96Q05 1148 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 TMED8Q6PL24 325 aaPredicted RBP14.63□□□□□ -0.07
TRIO-202ENST00000344204 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.63□□□□□ -0.07
TRIO-202ENST00000344204 TMPRSS15P98073 1019 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 DYMQ7RTS9 669 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 CEP170Q5SW79 1584 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 KIF23Q02241 960 aaPredicted RBP14.63□□□□□ -0.07
TRIO-202ENST00000344204 BSPRYQ5W0U4 402 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 APOBEC2Q9Y235 224 aaKnown RBP14.63□□□□□ -0.07
TRIO-202ENST00000344204 IQANK1A0A1B0GTG1 560 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 MESDQ14696 234 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 PDXDC1Q6P996 788 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 ERP27Q96DN0 273 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 SH3GL1Q99961 368 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 LRCH1Q9Y2L9 728 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 CHL1O00533 1208 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 SEC24CP53992 1094 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 CACNA2D1P54289 1103 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 AKNAD1Q5T1N1 836 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 PATL1Q86TB9 770 aaKnown RBP14.63□□□□□ -0.07
TRIO-202ENST00000344204 SLC39A2Q9NP94 309 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 RSRC2Q7L4I2 434 aaKnown RBP14.63□□□□□ -0.07
TRIO-202ENST00000344204 PARD3BQ8TEW8 1205 aa14.63□□□□□ -0.07
TRIO-202ENST00000344204 CCDC22O60826 627 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 CPP00450 1065 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 PLS1Q14651 629 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 TERB1Q8NA31 727 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 ZBTB3Q9H5J0 574 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 DKK3Q9UBP4 350 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 TRIM33Q9UPN9 1127 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 LIN7AO14910 233 aaPredicted RBP14.62□□□□□ -0.07
TRIO-202ENST00000344204 MB21D1Q8N884 522 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 DDI1Q8WTU0 396 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 LARGE1O95461 756 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 PAGE5Q96GU1 130 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 NR1H4Q96RI1 486 aaPredicted RBP14.62□□□□□ -0.07
TRIO-202ENST00000344204 IPO5O00410 1097 aaKnown RBP14.62□□□□□ -0.07
TRIO-202ENST00000344204 EIF4A2Q14240 407 aaKnown RBP14.62□□□□□ -0.07
TRIO-202ENST00000344204 EEF2KMTQ96G04 330 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 STX18Q9P2W9 335 aaKnown RBP14.62□□□□□ -0.07
TRIO-202ENST00000344204 ATP4AP20648 1035 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 FLOT2Q14254 428 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 SGK1O00141 431 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 PRPF6O94906 941 aaKnown RBP14.62□□□□□ -0.07
TRIO-202ENST00000344204 FAM43BQ6ZT52 329 aaPredicted RBP14.62□□□□□ -0.07
TRIO-202ENST00000344204 DPH6Q7L8W6 267 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 EXOC7Q9UPT5 735 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 CCNHP51946 323 aaPredicted RBP14.62□□□□□ -0.07
TRIO-202ENST00000344204 WAPLQ7Z5K2 1190 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 MTF1Q14872 753 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 TRAF7Q6Q0C0 670 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 MPP4Q96JB8 637 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 CDC42BPAQ5VT25 1732 aa14.62□□□□□ -0.07
TRIO-202ENST00000344204 EXOC3O60645 756 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 PMS1P54277 932 aaKnown RBP14.61□□□□□ -0.07
TRIO-202ENST00000344204 FAM133AQ8N9E0 248 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 FBLN1P23142 703 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 SASH1O94885 1247 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 GLT8D2Q9H1C3 349 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 TXKP42681 527 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 MMS19Q96T76 1030 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 METTL14Q9HCE5 456 aaKnown RBP14.61□□□□□ -0.07
TRIO-202ENST00000344204 DDX20Q9UHI6 824 aaKnown RBP14.61□□□□□ -0.07
TRIO-202ENST00000344204 LDHCP07864 332 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 BTKQ06187 659 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 PPP2R5DQ14738 602 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 KIF22Q14807 665 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 POLD4Q9HCU8 107 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 ZNF446Q9NWS9 450 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 CEP152O94986 1710 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 FAM170AA1A519 330 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 ORC4O43929 436 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 GPBP1Q86WP2 473 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 CAB39Q9Y376 341 aaPredicted RBP14.61□□□□□ -0.07
TRIO-202ENST00000344204 C2CD2Q9Y426 696 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 NCK2O43639 380 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 TRMT1LQ7Z2T5 733 aaKnown RBP14.61□□□□□ -0.07
TRIO-202ENST00000344204 SLC26A7Q8TE54 656 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 KRT82Q9NSB4 513 aa14.61□□□□□ -0.07
TRIO-202ENST00000344204 GGT7Q9UJ14 662 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms