RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 FBXO41Q8TF61 875 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 EIF3CQ99613 913 aaKnown RBP12.66□□□□□ -0.38
SHANK2-201ENST00000338508 QTRT2Q9H974 415 aaKnown RBP12.66□□□□□ -0.38
SHANK2-201ENST00000338508 L3MBTL1Q9Y468 752 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 ECEL1O95672 775 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 HSPA4LO95757 839 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 PSMA2P25787 234 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 HSP90AA5PQ58FG0 334 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 THEM5Q8N1Q8 247 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 ZBTB18Q99592 522 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 WARS2Q9UGM6 360 aaKnown RBP12.66□□□□□ -0.38
SHANK2-201ENST00000338508 STRIP2Q9ULQ0 834 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 TTLL1O95922 423 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 PPARGP37231 505 aaPredicted RBP12.66□□□□□ -0.38
SHANK2-201ENST00000338508 CATSPER3Q86XQ3 398 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 SRPK1Q96SB4 655 aaKnown RBP12.66□□□□□ -0.38
SHANK2-201ENST00000338508 EPAS1Q99814 870 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 NDFIP2Q9NV92 336 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 FGAP02671 866 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 EIF2AK2P19525 551 aaKnown RBP12.66□□□□□ -0.38
SHANK2-201ENST00000338508 RNF207Q6ZRF8 634 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 PYROXD1Q8WU10 500 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 TTC17Q96AE7 1141 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 SPZ1Q9BXG8 430 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 SLC27A3Q5K4L6 730 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 LARP4BQ92615 738 aaKnown RBP12.66□□□□□ -0.38
SHANK2-201ENST00000338508 GPR101Q96P66 508 aaPredicted RBP12.66□□□□□ -0.38
SHANK2-201ENST00000338508 DSCC1Q9BVC3 393 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 URB2Q14146 1524 aaKnown RBP12.66□□□□□ -0.38
SHANK2-201ENST00000338508 GTPBP6O43824 516 aaPredicted RBP12.66□□□□□ -0.38
SHANK2-201ENST00000338508 TCP1P17987 556 aaKnown RBP12.66□□□□□ -0.38
SHANK2-201ENST00000338508 KPNA2P52292 529 aaKnown RBP12.66□□□□□ -0.38
SHANK2-201ENST00000338508 TJAP1Q5JTD0 557 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 ARMCX2Q7L311 632 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 CCDC51Q96ER9 411 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 GSDMAQ96QA5 445 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 KLHL8Q9P2G9 620 aaPredicted RBP12.66□□□□□ -0.38
SHANK2-201ENST00000338508 SCINQ9Y6U3 715 aa12.66□□□□□ -0.38
SHANK2-201ENST00000338508 LONP1P36776 959 aaKnown RBP12.65□□□□□ -0.38
SHANK2-201ENST00000338508 USP17L2Q6R6M4 530 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 ULK4Q96C45 1275 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 HSPA8P11142 646 aaKnown RBP12.65□□□□□ -0.38
SHANK2-201ENST00000338508 SLC8A1P32418 973 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 RBL2Q08999 1139 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 NME3Q13232 169 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 EGFL8Q99944 293 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 GREM2Q9H772 168 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 ZRANB2O95218 330 aaKnown RBP eCLIP12.65□□□□□ -0.38
SHANK2-201ENST00000338508 PAMP19021 973 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 CTTNQ14247 550 aaKnown RBP12.65□□□□□ -0.38
SHANK2-201ENST00000338508 DDX53Q86TM3 631 aaKnown RBP12.65□□□□□ -0.38
SHANK2-201ENST00000338508 MSTO1Q9BUK6 570 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 WDR17Q8IZU2 1322 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 F8W8V4 182 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 LUC7L3O95232 432 aaKnown RBP12.65□□□□□ -0.38
SHANK2-201ENST00000338508 TWF2Q6IBS0 349 aaKnown RBP12.65□□□□□ -0.38
SHANK2-201ENST00000338508 SMAP1Q8IYB5 467 aaPredicted RBP12.65□□□□□ -0.38
SHANK2-201ENST00000338508 TRIML2Q8N7C3 387 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 CEP70Q8NHQ1 597 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 RFWD2Q8NHY2 731 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 CNKSR1Q969H4 720 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 SMAD5Q99717 465 aaKnown RBP12.65□□□□□ -0.38
SHANK2-201ENST00000338508 UBA6A0AVT1 1052 aaPredicted RBP12.65□□□□□ -0.38
SHANK2-201ENST00000338508 ESRRAP11474 423 aaPredicted RBP12.65□□□□□ -0.38
SHANK2-201ENST00000338508 THNSL1Q8IYQ7 743 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 TBCKQ8TEA7 893 aa12.65□□□□□ -0.38
SHANK2-201ENST00000338508 PACSIN2Q9UNF0 486 aaPredicted RBP12.65□□□□□ -0.38
SHANK2-201ENST00000338508 MCF2P10911 925 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 CATSPER4Q7RTX7 472 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 ING2Q9H160 280 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 MED23Q9ULK4 1368 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 KCNQ3O43525 872 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 RPAINQ86UA6 219 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 LRRC8AQ8IWT6 810 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 MARCH10Q8NA82 808 aaPredicted RBP12.64□□□□□ -0.39
SHANK2-201ENST00000338508 FGFR1OP2Q9NVK5 253 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 SUN2Q9UH99 717 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 PHKA1P46020 1223 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 KIAA1755Q5JYT7 1200 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 TRIM42Q8IWZ5 723 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 AGR3Q8TD06 166 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 UPF3AQ9H1J1 476 aaKnown RBP12.64□□□□□ -0.39
SHANK2-201ENST00000338508 TPCN1Q9ULQ1 816 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 CTNND1O60716 968 aaKnown RBP12.64□□□□□ -0.39
SHANK2-201ENST00000338508 IFNLR1Q8IU57 520 aaPredicted RBP12.64□□□□□ -0.39
SHANK2-201ENST00000338508 ASIC4Q96FT7 647 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 NAF1Q96HR8 494 aaKnown RBP12.64□□□□□ -0.39
SHANK2-201ENST00000338508 TEX12Q9BXU0 123 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 RAD18Q9NS91 495 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 BRD1O95696 1058 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 NNMTP40261 264 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 CENPAP49450 140 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 PEX3P56589 373 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 RFX8Q6ZV50 586 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 ENOX1Q8TC92 643 aaKnown RBP12.64□□□□□ -0.39
SHANK2-201ENST00000338508 EIF4E1BA6NMX2 242 aaKnown RBP12.64□□□□□ -0.39
SHANK2-201ENST00000338508 TAC1P20366 129 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 IQCDQ96DY2 449 aa12.64□□□□□ -0.39
SHANK2-201ENST00000338508 PIGSQ96S52 555 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms