RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 TRIM58Q8NG06 486 aa17.53■□□□□ 0.4
SYNM-201ENST00000328642 CHORDC1Q9UHD1 332 aaPredicted RBP17.53■□□□□ 0.4
SYNM-201ENST00000328642 PCDHA13Q9Y5I0 950 aa17.53■□□□□ 0.4
SYNM-201ENST00000328642 MED24O75448 989 aa17.53■□□□□ 0.4
SYNM-201ENST00000328642 ZNF394Q53GI3 561 aa17.53■□□□□ 0.4
SYNM-201ENST00000328642 LMBR1Q8WVP7 490 aa17.53■□□□□ 0.4
SYNM-201ENST00000328642 ZDHHC15Q96MV8 337 aa17.53■□□□□ 0.4
SYNM-201ENST00000328642 PDE11AQ9HCR9 933 aa17.53■□□□□ 0.4
SYNM-201ENST00000328642 NYAP2Q9P242 653 aa17.53■□□□□ 0.4
SYNM-201ENST00000328642 RGPD1P0DJD0 1748 aa17.52■□□□□ 0.4
SYNM-201ENST00000328642 NR3C1P04150 777 aa17.52■□□□□ 0.4
SYNM-201ENST00000328642 DMP1Q13316 513 aaPredicted RBP17.52■□□□□ 0.4
SYNM-201ENST00000328642 MKRN4PQ13434 485 aaPredicted RBP17.52■□□□□ 0.4
SYNM-201ENST00000328642 PLA2G4FQ68DD2 849 aa17.52■□□□□ 0.4
SYNM-201ENST00000328642 PDXDC2PQ6P474 469 aa17.52■□□□□ 0.4
SYNM-201ENST00000328642 CATSPER3Q86XQ3 398 aa17.52■□□□□ 0.4
SYNM-201ENST00000328642 GPR161Q8N6U8 529 aaKnown RBP17.52■□□□□ 0.4
SYNM-201ENST00000328642 LRRN4CLQ8ND94 238 aa17.52■□□□□ 0.4
SYNM-201ENST00000328642 KMT5AQ9NQR1 393 aa17.52■□□□□ 0.4
SYNM-201ENST00000328642 GNA14O95837 355 aa17.52■□□□□ 0.4
SYNM-201ENST00000328642 PSMC2P35998 433 aaKnown RBP17.52■□□□□ 0.4
SYNM-201ENST00000328642 FUT2Q10981 343 aa17.52■□□□□ 0.4
SYNM-201ENST00000328642 AP3B2Q13367 1082 aa17.52■□□□□ 0.4
SYNM-201ENST00000328642 CFAP58Q5T655 872 aa17.52■□□□□ 0.4
SYNM-201ENST00000328642 RNF187Q5TA31 235 aaPredicted RBP17.52■□□□□ 0.4
SYNM-201ENST00000328642 SWSAP1Q6NVH7 229 aa17.52■□□□□ 0.4
SYNM-201ENST00000328642 OTUD6AQ7L8S5 288 aa17.52■□□□□ 0.4
SYNM-201ENST00000328642 SUGT1Q9Y2Z0 365 aa17.52■□□□□ 0.4
SYNM-201ENST00000328642 MAP2K1Q02750 393 aaPredicted RBP17.52■□□□□ 0.39
SYNM-201ENST00000328642 DACT2Q5SW24 774 aa17.52■□□□□ 0.39
SYNM-201ENST00000328642 KRT12Q99456 494 aa17.52■□□□□ 0.39
SYNM-201ENST00000328642 TMEM150BA6NC51 233 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 INO80B-WBP1J3KQ70 363 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 MYL7Q01449 175 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 TRPC3Q13507 836 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 INO80BQ9C086 356 aaPredicted RBP17.51■□□□□ 0.39
SYNM-201ENST00000328642 HERC5Q9UII4 1024 aaKnown RBP17.51■□□□□ 0.39
SYNM-201ENST00000328642 KCPQ6ZWJ8 1503 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 RHOBTB3O94955 611 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 BCRP11274 1271 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 GUCY2DQ02846 1103 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 LRRC63Q05C16 580 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 KCTD16Q68DU8 428 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 GIMAP8Q8ND71 665 aaPredicted RBP17.51■□□□□ 0.39
SYNM-201ENST00000328642 AP1M1Q9BXS5 423 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 MYOZ2Q9NPC6 264 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 RNF181Q9P0P0 153 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 FAM198AQ9UFP1 575 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 SHTN1A0MZ66 631 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 SLC9A1P19634 815 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 SEPT7Q16181 437 aaKnown RBP17.51■□□□□ 0.39
SYNM-201ENST00000328642 CFAP221Q4G0U5 840 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 NBPF12Q5TAG4 269 aaPredicted RBP17.51■□□□□ 0.39
SYNM-201ENST00000328642 GUF1Q8N442 669 aaKnown RBP17.51■□□□□ 0.39
SYNM-201ENST00000328642 ATG4CQ96DT6 458 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 KIFC3Q9BVG8 833 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 SERPINA10Q9UK55 444 aa17.51■□□□□ 0.39
SYNM-201ENST00000328642 MYL1P05976 194 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 PPP1R7Q15435 360 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 DPY19L2Q6NUT2 758 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 FAM160B2Q86V87 743 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 PROM2Q8N271 834 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 FAM151AQ8WW52 585 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 PAIP2Q9BPZ3 127 aaKnown RBP17.5■□□□□ 0.39
SYNM-201ENST00000328642 GGA3Q9NZ52 723 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 GABBR1Q9UBS5 961 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 ESYT3A0FGR9 886 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 HOXA10P31260 410 aaPredicted RBP17.5■□□□□ 0.39
SYNM-201ENST00000328642 TNNC1P63316 161 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 GRIPAP1Q4V328 841 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 NFRKBQ6P4R8 1299 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 GJB7Q6PEY0 223 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 VCPKMTQ9H867 229 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 USP20Q9Y2K6 914 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 PVALEFA0A1B0GWK0 134 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 PRELPP51888 382 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 LONRF2Q1L5Z9 754 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 ALKBH5Q6P6C2 394 aaKnown RBP17.5■□□□□ 0.39
SYNM-201ENST00000328642 PURBQ96QR8 312 aaKnown RBP17.5■□□□□ 0.39
SYNM-201ENST00000328642 MPHOSPH6Q99547 160 aaKnown RBP17.5■□□□□ 0.39
SYNM-201ENST00000328642 EXOC7Q9UPT5 735 aa17.5■□□□□ 0.39
SYNM-201ENST00000328642 NFIBO00712 420 aa17.49■□□□□ 0.39
SYNM-201ENST00000328642 ARP10275 920 aa17.49■□□□□ 0.39
SYNM-201ENST00000328642 PRPHP41219 470 aa17.49■□□□□ 0.39
SYNM-201ENST00000328642 KNOP1Q1ED39 458 aaKnown RBP17.49■□□□□ 0.39
SYNM-201ENST00000328642 BBXQ8WY36 941 aaPredicted RBP17.49■□□□□ 0.39
SYNM-201ENST00000328642 METTL14Q9HCE5 456 aaKnown RBP17.49■□□□□ 0.39
SYNM-201ENST00000328642 SPDYE2BA6NHP3 402 aa17.49■□□□□ 0.39
SYNM-201ENST00000328642 MSH4O15457 936 aa17.49■□□□□ 0.39
SYNM-201ENST00000328642 ATP1A1P05023 1023 aaKnown RBP17.49■□□□□ 0.39
SYNM-201ENST00000328642 SPDYE6P0CI01 402 aa17.49■□□□□ 0.39
SYNM-201ENST00000328642 APOL6Q9BWW8 343 aa17.49■□□□□ 0.39
SYNM-201ENST00000328642 CD58P19256 250 aa17.49■□□□□ 0.39
SYNM-201ENST00000328642 RIOX1Q9H6W3 641 aa17.49■□□□□ 0.39
SYNM-201ENST00000328642 LMO7Q8WWI1 1683 aa17.49■□□□□ 0.39
SYNM-201ENST00000328642 PHLPP2Q6ZVD8 1323 aa17.49■□□□□ 0.39
SYNM-201ENST00000328642 KRIT1O00522 736 aa17.48■□□□□ 0.39
SYNM-201ENST00000328642 ATP1A2P50993 1020 aa17.48■□□□□ 0.39
SYNM-201ENST00000328642 USP11P51784 963 aa17.48■□□□□ 0.39
SYNM-201ENST00000328642 FAM20AQ96MK3 541 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms