RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 EPB41L5Q9HCM4 733 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 ARMCX3Q9UH62 379 aaPredicted RBP15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 PCDHB13Q9Y5F0 798 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 MYO1CO00159 1063 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 CHMP2AO43633 222 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 LCA5LO95447 670 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 ICA1Q05084 483 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 AENQ8WTP8 325 aaKnown RBP15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 NFU1Q9UMS0 254 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 GNA14O95837 355 aa15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 MYBP10242 640 aa15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 KCTD16Q68DU8 428 aa15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 P2RX7Q99572 595 aaKnown RBP15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 REEP2Q9BRK0 252 aa15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 BHMT2Q9H2M3 363 aa15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 ATF5Q9Y2D1 282 aaPredicted RBP15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 COL24A1Q17RW2 1714 aa15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 HEXIM1O94992 359 aaKnown RBP15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 GCNT3O95395 438 aa15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 TSEN2Q8NCE0 465 aaKnown RBP15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 TAF4BQ92750 862 aa15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 IKZF4Q9H2S9 585 aa15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 KCTD10Q9H3F6 313 aa15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 RGL1Q9NZL6 768 aa15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 SBF2Q86WG5 1849 aa15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 PLIN4Q96Q06 1357 aa15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 ZC3H4Q9UPT8 1303 aaKnown RBP15.43■□□□□ 0.06
ATP2C1-201ENST00000328560 PJA2O43164 708 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 PRLRP16471 622 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 CARSP49589 748 aaKnown RBP15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 SLC18A3Q16572 532 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 ERMNQ8TAM6 284 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 PIGOQ8TEQ8 1089 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 EDEM3Q9BZQ6 932 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 NUCKS1Q9H1E3 243 aaKnown RBP15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 EHD4Q9H223 541 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 F5H6K3 240 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 GLI1P08151 1106 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 UBXN2AP68543 259 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 PTK2Q05397 1052 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 KLRC3Q07444 240 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 MASTLQ96GX5 879 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 PCDHA2Q9Y5H9 948 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 TMCO5BA8MYB1 307 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 KCNK3O14649 394 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 MEIS2O14770 477 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 ONECUT3O60422 494 aaPredicted RBP15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 HSF2BPO75031 334 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 KCNA1Q09470 495 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 FBXO11Q86XK2 927 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 SLFN12Q8IYM2 578 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 RNF10Q8N5U6 811 aaKnown RBP15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 AMNQ9BXJ7 453 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 KCNMB3Q9NPA1 279 aa15.42■□□□□ 0.06
ATP2C1-201ENST00000328560 FAM86B1E9PN63 330 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 TBCAO75347 108 aaKnown RBP15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 FAM86B2P0C5J1 330 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 USP11P51784 963 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 SLC12A3P55017 1021 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 NAB2Q15742 525 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 GJB7Q6PEY0 223 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 PODNQ7Z5L7 613 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 DHX37Q8IY37 1157 aaKnown RBP15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 XRCC5P13010 732 aaKnown RBP15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 CASP4P49662 377 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 EPHB4P54760 987 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 GIT2Q14161 759 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 HLTFQ14527 1009 aaKnown RBP eCLIP15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 TRADDQ15628 312 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 EXOC3L4Q17RC7 722 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 SRLQ86TD4 932 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 NAP1L4Q99733 375 aaKnown RBP15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 FEZ2Q9UHY8 353 aaPredicted RBP15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 H0YIN7 160 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 TULP2O00295 520 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 KNOP1Q1ED39 458 aaKnown RBP15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 HHIPL2Q6UWX4 724 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 ARL8AQ96BM9 186 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 CENPHQ9H3R5 247 aa15.41■□□□□ 0.06
ATP2C1-201ENST00000328560 FAM153BP0C7A2 387 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 CTTNQ14247 550 aaKnown RBP15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 FAM153CQ494X1 144 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 IFT20Q8IY31 132 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 SH2D3CQ8N5H7 860 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 CCDC43Q96MW1 224 aaKnown RBP15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 GLT8D2Q9H1C3 349 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 FAM153AQ9UHL3 310 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 CEP104O60308 925 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 AFPP02771 609 aaKnown RBP15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 ATP1A2P50993 1020 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 KSR1Q8IVT5 923 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 TPH2Q8IWU9 490 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 PI4KBQ9UBF8 816 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 AKAP3O75969 853 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 NDUFB10O96000 172 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 KRT14P02533 472 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 UCHL3P15374 230 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 RPS6KA1Q15418 735 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 HYIQ5T013 277 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 ZNF571Q7Z3V5 609 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms