RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 SHTN1A0MZ66 631 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 KCNJ18B7U540 433 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 GUCY1A2P33402 732 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 SP3Q02447 781 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 KCNJ12Q14500 433 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 GRIK5Q16478 980 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 EIF2AK1Q9BQI3 630 aaKnown RBP10.13□□□□□ -0.79
PTPRE-202ENST00000306042 LSM14BQ9BX40 385 aaKnown RBP10.13□□□□□ -0.79
PTPRE-202ENST00000306042 MIS12Q9H081 205 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 A0A087WWV3 80 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 NFKBIEO00221 500 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 PSMD2Q13200 908 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 SNW1Q13573 536 aaKnown RBP10.13□□□□□ -0.79
PTPRE-202ENST00000306042 NT5C1BQ96P26 610 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 POLR3FQ9H1D9 316 aaPredicted RBP10.13□□□□□ -0.79
PTPRE-202ENST00000306042 NUCKS1Q9H1E3 243 aaKnown RBP10.13□□□□□ -0.79
PTPRE-202ENST00000306042 ERAP1Q9NZ08 941 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 STIM2Q9P246 746 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 E9PMD0 336 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 PPP2R3AQ06190 1150 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 EEF2KMTQ96G04 330 aa10.13□□□□□ -0.79
PTPRE-202ENST00000306042 MAP3K20Q9NYL2 800 aaKnown RBP10.13□□□□□ -0.79
PTPRE-202ENST00000306042 POTEFA5A3E0 1075 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 ZNF233A6NK53 670 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 MAGEB2O15479 319 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 FKTNO75072 461 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 POTEIP0CG38 1075 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 FKBP3Q00688 224 aaKnown RBP10.12□□□□□ -0.79
PTPRE-202ENST00000306042 SFMBT2Q5VUG0 894 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 POTEGQ6S5H5 508 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 POTEEQ6S8J3 1075 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 GSTA5Q7RTV2 222 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 MXRA8Q9BRK3 442 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 LMBRD1Q9NUN5 540 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 NXF1Q9UBU9 619 aaKnown RBP10.12□□□□□ -0.79
PTPRE-202ENST00000306042 MAD2L2Q9UI95 211 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 PCDHAC2Q9Y5I4 1007 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 YDJCA8MPS7 323 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 MYL7Q01449 175 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 HLTFQ14527 1009 aaKnown RBP eCLIP10.12□□□□□ -0.79
PTPRE-202ENST00000306042 TAF3Q5VWG9 929 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 DHTKD1Q96HY7 919 aaPredicted RBP10.12□□□□□ -0.79
PTPRE-202ENST00000306042 TROAPQ12815 778 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 RSRC2Q7L4I2 434 aaKnown RBP10.12□□□□□ -0.79
PTPRE-202ENST00000306042 LRP10Q7Z4F1 713 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 ZSCAN30Q86W11 494 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 SMAP1Q8IYB5 467 aaPredicted RBP10.12□□□□□ -0.79
PTPRE-202ENST00000306042 RNF208Q9H0X6 261 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 CTTNBP2NLQ9P2B4 639 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 GUCA1BQ9UMX6 200 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 FAM208AQ9UK61 1670 aaKnown RBP10.12□□□□□ -0.79
PTPRE-202ENST00000306042 STXBP3O00186 592 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 PTPREP23469 700 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 RHBDL3P58872 404 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 ERVK-9P63128 1117 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 ERVK-24P63145 666 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 GPRASP2Q96D09 838 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 IQCDQ96DY2 449 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 C16orf45Q96MC5 204 aaPredicted RBP10.12□□□□□ -0.79
PTPRE-202ENST00000306042 TIGD1Q96MW7 591 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 CRACR2AQ9BSW2 395 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 SENP2Q9HC62 589 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 PEAK1Q9H792 1746 aa10.12□□□□□ -0.79
PTPRE-202ENST00000306042 SLC16A4O15374 487 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 CYP2C9P11712 490 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 YWHABP31946 246 aaKnown RBP10.11□□□□□ -0.79
PTPRE-202ENST00000306042 RRAGAQ7L523 313 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 SAMD3Q8N6K7 520 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 RNF149Q8NC42 400 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 DDX12PQ92771 950 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 CAPNS2Q96L46 248 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 HMX1Q9NP08 348 aaPredicted RBP10.11□□□□□ -0.79
PTPRE-202ENST00000306042 SSX2IPQ9Y2D8 614 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 VWA5AO00534 786 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 TAX1BP1Q86VP1 789 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 GPIHBP1Q8IV16 184 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 GRAMD1CQ8IYS0 662 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 P2RX5Q93086 422 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 CBX8Q9HC52 389 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 SUCLA2Q9P2R7 463 aaPredicted RBP10.11□□□□□ -0.79
PTPRE-202ENST00000306042 POLIQ9UNA4 740 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 GDAQ9Y2T3 454 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 RRN3P2A6NIE6 340 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 TBX3O15119 743 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 HOXA7P31268 230 aaPredicted RBP10.11□□□□□ -0.79
PTPRE-202ENST00000306042 PDE6CP51160 858 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 ATN1P54259 1190 aaPredicted RBP10.11□□□□□ -0.79
PTPRE-202ENST00000306042 EXOC3L4Q17RC7 722 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 TEX35Q5T0J7 233 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 CYP4F22Q6NT55 531 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 WNK4Q96J92 1243 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 GCNAQ96QF7 691 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 PIN4Q9Y237 131 aaKnown RBP10.11□□□□□ -0.79
PTPRE-202ENST00000306042 LTBP4Q8N2S1 1624 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 ATP8B3O60423 1300 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 CNTNAP5Q8WYK1 1306 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 GOLGA8IPA6NC78 632 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 GOLGA8JA6NMD2 632 aa10.11□□□□□ -0.79
PTPRE-202ENST00000306042 SND1Q7KZF4 910 aaKnown RBP eCLIP10.11□□□□□ -0.79
PTPRE-202ENST00000306042 FBXO16Q8IX29 292 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms