RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 FAM178BQ8IXR5 827 aa17.85■□□□□ 0.45
CTCF-201ENST00000264010 GMCL1P1Q8NEA9 526 aa17.85■□□□□ 0.45
CTCF-201ENST00000264010 ZBTB21Q9ULJ3 1066 aa17.85■□□□□ 0.45
CTCF-201ENST00000264010 ANO9A1A5B4 782 aa17.85■□□□□ 0.45
CTCF-201ENST00000264010 SERPING1P05155 500 aa17.85■□□□□ 0.45
CTCF-201ENST00000264010 RASSF7Q02833 373 aa17.85■□□□□ 0.45
CTCF-201ENST00000264010 PRPF38AQ8NAV1 312 aaKnown RBP17.85■□□□□ 0.45
CTCF-201ENST00000264010 NACC1Q96RE7 527 aa17.85■□□□□ 0.45
CTCF-201ENST00000264010 FAM198AQ9UFP1 575 aa17.85■□□□□ 0.45
CTCF-201ENST00000264010 PRPF6O94906 941 aaKnown RBP17.85■□□□□ 0.45
CTCF-201ENST00000264010 INPP5BP32019 993 aa17.85■□□□□ 0.45
CTCF-201ENST00000264010 TNFAIP1Q13829 316 aa17.85■□□□□ 0.45
CTCF-201ENST00000264010 MIER3Q7Z3K6 550 aa17.85■□□□□ 0.45
CTCF-201ENST00000264010 ZNF507Q8TCN5 953 aa17.85■□□□□ 0.45
CTCF-201ENST00000264010 PRMT6Q96LA8 375 aaPredicted RBP17.85■□□□□ 0.45
CTCF-201ENST00000264010 HINFPQ9BQA5 517 aa17.85■□□□□ 0.45
CTCF-201ENST00000264010 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.85■□□□□ 0.45
CTCF-201ENST00000264010 NPHP3-ACAD11A0A0J9YXS1 232 aa17.84■□□□□ 0.45
CTCF-201ENST00000264010 MCF2L2Q86YR7 1114 aa17.84■□□□□ 0.45
CTCF-201ENST00000264010 PSMB7Q99436 277 aa17.84■□□□□ 0.45
CTCF-201ENST00000264010 SELENOOQ9BVL4 669 aa17.84■□□□□ 0.45
CTCF-201ENST00000264010 GOLGA6L10A6NI86 522 aa17.84■□□□□ 0.45
CTCF-201ENST00000264010 FLOT1O75955 427 aa17.84■□□□□ 0.45
CTCF-201ENST00000264010 TRIM10Q9UDY6 481 aa17.84■□□□□ 0.45
CTCF-201ENST00000264010 PITPNM2Q9BZ72 1349 aa17.84■□□□□ 0.45
CTCF-201ENST00000264010 RREB1Q92766 1687 aa17.84■□□□□ 0.45
CTCF-201ENST00000264010 CTTNQ14247 550 aaKnown RBP17.84■□□□□ 0.45
CTCF-201ENST00000264010 KNOP1Q1ED39 458 aaKnown RBP17.84■□□□□ 0.45
CTCF-201ENST00000264010 RSBN1LQ6PCB5 846 aaPredicted RBP17.84■□□□□ 0.45
CTCF-201ENST00000264010 FAM151AQ8WW52 585 aa17.84■□□□□ 0.45
CTCF-201ENST00000264010 PIK3R5Q8WYR1 880 aa17.84■□□□□ 0.45
CTCF-201ENST00000264010 ASNSP08243 561 aa17.83■□□□□ 0.45
CTCF-201ENST00000264010 RPA1P27694 616 aa17.83■□□□□ 0.45
CTCF-201ENST00000264010 EXOC3O60645 756 aa17.83■□□□□ 0.44
CTCF-201ENST00000264010 ALAS1P13196 640 aa17.83■□□□□ 0.44
CTCF-201ENST00000264010 BAG6P46379 1132 aa17.83■□□□□ 0.44
CTCF-201ENST00000264010 PDXDC1Q6P996 788 aa17.83■□□□□ 0.44
CTCF-201ENST00000264010 EIF2AK1Q9BQI3 630 aaKnown RBP17.83■□□□□ 0.44
CTCF-201ENST00000264010 ZBED4O75132 1171 aa17.83■□□□□ 0.44
CTCF-201ENST00000264010 SLURP2P0DP57 97 aa17.83■□□□□ 0.44
CTCF-201ENST00000264010 CYP11B2P19099 503 aa17.83■□□□□ 0.44
CTCF-201ENST00000264010 CFAP221Q4G0U5 840 aa17.83■□□□□ 0.44
CTCF-201ENST00000264010 COBLL1Q53SF7 1204 aa17.83■□□□□ 0.44
CTCF-201ENST00000264010 GOLGA5Q8TBA6 731 aa17.83■□□□□ 0.44
CTCF-201ENST00000264010 ZNF70Q9UC06 446 aaPredicted RBP17.83■□□□□ 0.44
CTCF-201ENST00000264010 BZW2Q9Y6E2 419 aaKnown RBP17.83■□□□□ 0.44
CTCF-201ENST00000264010 BUB1O43683 1085 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
CTCF-201ENST00000264010 MOCS3O95396 460 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 RPSAP08865 295 aaKnown RBP17.82■□□□□ 0.44
CTCF-201ENST00000264010 KCNK18Q7Z418 384 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 HAS1Q92839 578 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 PARVGQ9HBI0 331 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 ZNF277Q9NRM2 450 aaPredicted RBP17.82■□□□□ 0.44
CTCF-201ENST00000264010 HOMER2Q9NSB8 354 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 PSMD14O00487 310 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 KIAA0753Q2KHM9 967 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 ODR4Q5SWX8 454 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 MAEAQ7L5Y9 396 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 CCDC114Q96M63 670 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 FEM1BQ9UK73 627 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 PLAGL2Q9UPG8 496 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 COL5A3P25940 1745 aaPredicted RBP17.82■□□□□ 0.44
CTCF-201ENST00000264010 PPP1R11O60927 126 aaPredicted RBP17.82■□□□□ 0.44
CTCF-201ENST00000264010 EYA4O95677 639 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 SREBF1P36956 1147 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 CYP2J2P51589 502 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 KCNH2Q12809 1159 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 PIGOQ8TEQ8 1089 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 PCDHAC2Q9Y5I4 1007 aa17.82■□□□□ 0.44
CTCF-201ENST00000264010 CLIC2O15247 247 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 MED24O75448 989 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 EDRF1Q3B7T1 1238 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 CATSPER3Q86XQ3 398 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 HDAC6Q9UBN7 1215 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 COL4A1P02462 1669 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 A0A1B0GUA9 196 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 ATP1A1P05023 1023 aaKnown RBP17.81■□□□□ 0.44
CTCF-201ENST00000264010 MYCLP12524 364 aaPredicted RBP17.81■□□□□ 0.44
CTCF-201ENST00000264010 POLD1P28340 1107 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 PRELPP51888 382 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 CDK17Q00537 523 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 SLC15A2Q16348 729 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 FAM186BQ8IYM0 893 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 NCAPGQ9BPX3 1015 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 CAPN7Q9Y6W3 813 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 PSMC2P35998 433 aaKnown RBP17.81■□□□□ 0.44
CTCF-201ENST00000264010 C8orf74Q6P047 294 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 FAM133AQ8N9E0 248 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 AKT1S1Q96B36 256 aa17.81■□□□□ 0.44
CTCF-201ENST00000264010 TYW1Q9NV66 732 aaKnown RBP17.81■□□□□ 0.44
CTCF-201ENST00000264010 LARSQ9P2J5 1176 aaKnown RBP17.81■□□□□ 0.44
CTCF-201ENST00000264010 NSMFQ6X4W1 530 aa17.8■□□□□ 0.44
CTCF-201ENST00000264010 RNF225M0QZC1 329 aaPredicted RBP17.8■□□□□ 0.44
CTCF-201ENST00000264010 SRGAP2O75044 1071 aa17.8■□□□□ 0.44
CTCF-201ENST00000264010 RSRC2Q7L4I2 434 aaKnown RBP17.8■□□□□ 0.44
CTCF-201ENST00000264010 CCDC155Q8N6L0 562 aa17.8■□□□□ 0.44
CTCF-201ENST00000264010 MICAL1Q8TDZ2 1067 aa17.8■□□□□ 0.44
CTCF-201ENST00000264010 DYDC2Q96IM9 177 aa17.8■□□□□ 0.44
CTCF-201ENST00000264010 PNMA2Q9UL42 364 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms