RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 RTFDC1Q9BY42 306 aaPredicted RBP15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 TAOK3Q9H2K8 898 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 FAM169AQ9Y6X4 670 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 TLR2O60603 784 aa15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 AKR1B1P15121 316 aa15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 DCAF17Q5H9S7 520 aaPredicted RBP15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 FZD1Q9UP38 647 aa15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 H0YHG0 523 aa15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 CEP104O60308 925 aa15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 CRKP46108 304 aa15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 GUCY1A3Q02108 690 aa15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 TTMPQ5BVD1 217 aa15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 NIM1KQ8IY84 436 aa15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 PRMT6Q96LA8 375 aaPredicted RBP15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 AP1M1Q9BXS5 423 aa15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 LUC7LQ9NQ29 371 aaKnown RBP15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 SNAP25P60880 206 aa15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 C16orf86Q6ZW13 317 aa15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 CDAN1Q8IWY9 1227 aa15.9■□□□□ 0.14
SFSWAP-201ENST00000261674 GOLGA8KD6RF30 607 aa15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 NFKBIEO00221 500 aa15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 SLC20A2Q08357 652 aa15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 SF3A3Q12874 501 aaKnown RBP eCLIP15.89■□□□□ 0.135e-7■■■■■ 31.3
SFSWAP-201ENST00000261674 HGSNATQ68CP4 663 aa15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 DDX42Q86XP3 938 aaKnown RBP eCLIP15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 ARAP2Q8WZ64 1704 aa15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 HNRNPH3P31942 346 aaKnown RBP15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 PRELPP51888 382 aa15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 EMBQ6PCB8 327 aa15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 SAMD7Q7Z3H4 446 aa15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 PODNQ7Z5L7 613 aa15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 USP17L10C9JJH3 530 aa15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 CXCL9Q07325 125 aa15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 DACT2Q5SW24 774 aa15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 RNF187Q5TA31 235 aaPredicted RBP15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 ADGRF4Q8IZF3 695 aa15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 TEKT1Q969V4 418 aa15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 PSTPIP2Q9H939 334 aa15.89■□□□□ 0.13
SFSWAP-201ENST00000261674 CASZ1Q86V15 1759 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 COL11A2P13942 1736 aaPredicted RBP15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 SERPING1P05155 500 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 SLC9A1P19634 815 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 PPP4CP60510 307 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 IKQ13123 557 aaPredicted RBP15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 ASIC2Q16515 512 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 CEP85LQ5SZL2 805 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 CCDC65Q8IXS2 484 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 OR2W6PQ8NHA6 318 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 RIC8AQ9NPQ8 531 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 EMILIN3Q9NT22 766 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 ASTN2O75129 1339 aaPredicted RBP15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 ERLIN2O94905 339 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 PLA2G4BP0C869 781 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 PABPC4Q13310 644 aaKnown RBP eCLIP15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 TBC1D10BQ4KMP7 808 aaPredicted RBP15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 ODF2Q5BJF6 829 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 CDC42EP5Q6NZY7 148 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 MIGA2Q7L4E1 593 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 TADA2BQ86TJ2 420 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 RTKN2Q8IZC4 609 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 TRIM31Q9BZY9 425 aa15.88■□□□□ 0.13
SFSWAP-201ENST00000261674 POTEFA5A3E0 1075 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 EIF3HO15372 352 aaKnown RBP eCLIP15.87■□□□□ 0.132e-8■■□□□ 11.9
SFSWAP-201ENST00000261674 NOL4O94818 638 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 POTEIP0CG38 1075 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 NR2F2P24468 414 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 GTF2A1P52655 376 aaPredicted RBP15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 SEC24CP53992 1094 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 CYP4A11Q02928 519 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 KCNH2Q12809 1159 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 PAK2Q13177 524 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 PRKG1Q13976 671 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 POTEGQ6S5H5 508 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 POTEEQ6S8J3 1075 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 ADAT2Q7Z6V5 191 aaKnown RBP15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 MTMR4Q9NYA4 1195 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 CEP72Q9P209 647 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 FXR2P51116 673 aaKnown RBP eCLIP15.87■□□□□ 0.134e-8■■■■■ 35.7
SFSWAP-201ENST00000261674 RPS6KA1Q15418 735 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 FBXW10Q5XX13 1052 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 JMJD4Q9H9V9 463 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 PPANQ9NQ55 473 aaKnown RBP15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 SFI1A8K8P3 1242 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 EDIL3O43854 480 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 PRLRP16471 622 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 MRPL12P52815 198 aaKnown RBP15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 PRPF4BQ13523 1007 aaKnown RBP15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 NBPF9Q3BBW0 867 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 NAA35Q5VZE5 725 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 TBC1D22AQ8WUA7 517 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 CASKIN2Q8WXE0 1202 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 HAS1Q92839 578 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 DNAJC19Q96DA6 116 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 RNPC3Q96LT9 517 aaKnown RBP15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 SGIP1Q9BQI5 828 aa15.87■□□□□ 0.13
SFSWAP-201ENST00000261674 A0A1B0GUL6 1792 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 BACH1O14867 736 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 CETN3O15182 167 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 CLIC2O15247 247 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms