RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 CLCN5P51795 746 aa3.96□□□□□ -1.78
PHTF2-201ENST00000248550 SP4Q02446 784 aa3.96□□□□□ -1.78
PHTF2-201ENST00000248550 MECOMQ03112 1051 aa3.96□□□□□ -1.78
PHTF2-201ENST00000248550 PDE4CQ08493 712 aa3.96□□□□□ -1.78
PHTF2-201ENST00000248550 NPAS4Q8IUM7 802 aa3.96□□□□□ -1.78
PHTF2-201ENST00000248550 TEX2Q8IWB9 1127 aa3.96□□□□□ -1.78
PHTF2-201ENST00000248550 DCP1BQ8IZD4 617 aaKnown RBP3.96□□□□□ -1.78
PHTF2-201ENST00000248550 STAG1Q8WVM7 1258 aa3.96□□□□□ -1.78
PHTF2-201ENST00000248550 TRERF1Q96PN7 1200 aa3.96□□□□□ -1.78
PHTF2-201ENST00000248550 PHAXQ9H814 394 aaKnown RBP3.96□□□□□ -1.78
PHTF2-201ENST00000248550 SFXN1Q9H9B4 322 aa3.96□□□□□ -1.78
PHTF2-201ENST00000248550 LRRC4CQ9HCJ2 640 aa3.96□□□□□ -1.78
PHTF2-201ENST00000248550 LAMB2P55268 1798 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 BRCA1P38398 1863 aaKnown RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 CXCL14O95715 111 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 GH2P01242 217 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 PSAPP07602 524 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 JUPP14923 745 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 ATP2B1P20020 1258 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 CAP2P40123 477 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 YWHAEP62258 255 aaKnown RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 RAD51Q06609 339 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 C2orf27AQ580R0 203 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 CEP135Q66GS9 1140 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 PKN3Q6P5Z2 889 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 AGMOQ6ZNB7 445 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 TRIM67Q6ZTA4 783 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 CACNA2D4Q7Z3S7 1137 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 HERC6Q8IVU3 1022 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 MRPL38Q96DV4 380 aaKnown RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 FAM124BQ9H5Z6 455 aaPredicted RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 CCDC86Q9H6F5 360 aaKnown RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 GPR108Q9NPR9 543 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 TMEM260Q9NX78 707 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 DONSONQ9NYP3 566 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 ZBTB21Q9ULJ3 1066 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 DDX19BQ9UMR2 479 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 CCDC194A0A1B0GVG4 234 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 KDM1AO60341 852 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 TOP1P11387 765 aaKnown RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 CYP2C9P11712 490 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 KCNA3P22001 575 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 NOVA1P51513 510 aaKnown RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 IGBP1P78318 339 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 KCNC4Q03721 635 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 PTK7Q13308 1070 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 KRT32Q14532 448 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 PRAMEF19Q5SWL8 479 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 ASTLQ6HA08 431 aaPredicted RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 PDZD4Q76G19 769 aaPredicted RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 WDR63Q8IWG1 891 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 OXR1Q8N573 874 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 NSMCE1Q8WV22 266 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 FUBP3Q96I24 572 aaKnown RBP eCLIP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 RIOK1Q9BRS2 568 aaKnown RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 THUMPD2Q9BTF0 503 aaKnown RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 C1QTNF7Q9BXJ2 289 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 FAM49AQ9H0Q0 323 aaPredicted RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 CLIP2Q9UDT6 1046 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 PHF24Q9UPV7 400 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 USP16Q9Y5T5 823 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 ZNF233A6NK53 670 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 KIAA0355O15063 1070 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 LRP3O75074 770 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 PHACTR2O75167 634 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 COL2A1P02458 1487 aaPredicted RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 NBPF7P0C2Y1 421 aaPredicted RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 ZNF18P17022 549 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 CXCL12P48061 93 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 SLC26A2P50443 739 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 AAMPQ13685 434 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 FBXO43Q4G163 708 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 PABPC1LQ4VXU2 614 aaKnown RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 NFRKBQ6P4R8 1299 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 TMEM57Q8N5G2 664 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 ADAMTSL1Q8N6G6 1762 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 CELF5Q8N6W0 485 aaKnown RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 DEPTORQ8TB45 409 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 FOXJ1Q92949 421 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 NXPE2Q96DL1 559 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 LRFN3Q9BTN0 628 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 GBP3Q9H0R5 595 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 NCKIPSDQ9NZQ3 722 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 MORF4L1Q9UBU8 362 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 LHX6Q9UPM6 363 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 IGSF9BQ9UPX0 1349 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 INPP5FQ9Y2H2 1132 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 PCDHB3Q9Y5E6 796 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 ASAP2O43150 1006 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 SMARCA5O60264 1052 aaPredicted RBP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 TBC1D12O60347 775 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 DFNA5O60443 496 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 CYP2C8P10632 490 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 CPB1P15086 417 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 PSEN2P49810 448 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 FXR1P51114 621 aaKnown RBP eCLIP3.95□□□□□ -1.78
PHTF2-201ENST00000248550 RBPJQ06330 500 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 FOXC1Q12948 553 aa3.95□□□□□ -1.78
PHTF2-201ENST00000248550 LRRC41Q15345 812 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms