RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 TRAPPC3LQ5T215 181 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 RASGEF1CQ8N431 466 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 CCDC47Q96A33 483 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 CCDC43Q96MW1 224 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 P2RX7Q99572 595 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 NUCKS1Q9H1E3 243 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 EPN3Q9H201 632 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 KCNMB3Q9NPA1 279 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 ZNFX1Q9P2E3 1918 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 BAG3O95817 575 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 FTCDO95954 541 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 CASP5P51878 434 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 ZNF571Q7Z3V5 609 aaPredicted RBP13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 IFT20Q8IY31 132 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 MYOCDQ8IZQ8 938 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 GOLGA6L1Q8N7Z2 621 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 ACTRT1Q8TDG2 376 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 TXLNGYQ9BZA5 131 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 ISCUQ9H1K1 167 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 YY1AP1Q9H869 796 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 TMBIM4Q9HC24 238 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 PLCB1Q9NQ66 1216 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 BYSLQ13895 437 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 SLC9C1Q4G0N8 1177 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 SFMBT2Q5VUG0 894 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 NAA35Q5VZE5 725 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 TTBK2Q6IQ55 1244 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 MAEAQ7L5Y9 396 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 TBC1D5Q92609 795 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 GGA2Q9UJY4 613 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 RPS6KA4O75676 772 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 FGFR1OPO95684 399 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 GUCY1A3Q02108 690 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 GUCY2DQ02846 1103 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 PTGISQ16647 500 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 TCERG1LQ5VWI1 586 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 BORCS6Q96GS4 357 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 SYT11Q9BT88 431 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 ANKRD31Q8N7Z5 1873 aa13.13□□□□□ -0.31
SEC61A1-201ENST00000243253 A6NNZ2 444 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 CYP11B2P19099 503 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 GSTO1P78417 241 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 PTK2Q05397 1052 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 TUBB8Q3ZCM7 444 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 KCTD16Q68DU8 428 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 PPP1R18Q6NYC8 613 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 MMS22LQ6ZRQ5 1243 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 SNX29Q8TEQ0 813 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 ATP6V1G3Q96LB4 118 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 DBNDD1Q9H9R9 158 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 PPP1R1BQ9UD71 204 aaPredicted RBP13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 SAMM50Q9Y512 469 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 PCDHAC2Q9Y5I4 1007 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 NPHP3-ACAD11A0A0J9YXS1 232 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 MEIS1O00470 390 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 PRKCIP41743 596 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 GRAPQ13588 217 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 LLGL1Q15334 1064 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 GRAPLQ8TC17 118 aaPredicted RBP13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 WHAMMQ8TF30 809 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 CYP3A7-CYP3A51PA0A087WV96 503 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 EBAG9O00559 213 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 CHMP2AO43633 222 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 IBSPP21815 317 aaPredicted RBP13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 CYP3A7P24462 503 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 HNRNPH1P31943 449 aaKnown RBP13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 FLT3P36888 993 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 USP11P51784 963 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 CYP4A11Q02928 519 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 PLCD3Q8N3E9 789 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 KRT12Q99456 494 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 LSM14BQ9BX40 385 aaKnown RBP13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 PANK4Q9NVE7 773 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 TRAF3IP3Q9Y228 551 aa13.12□□□□□ -0.31
SEC61A1-201ENST00000243253 HSF2BPO75031 334 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 EDRF1Q3B7T1 1238 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 CACNA2D4Q7Z3S7 1137 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 ADAMTS1Q9UHI8 967 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 FBXL5Q9UKA1 691 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 E9PMD0 336 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 ERLIN2O94905 339 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 HSD17B3P37058 310 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 MDH1P40925 334 aaKnown RBP13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 EPS15P42566 896 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 LIG3P49916 1009 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 ADCY7P51828 1080 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 GSCP56915 257 aaPredicted RBP13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 FBXW10Q5XX13 1052 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 CCDC70Q6NSX1 233 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 ADGRF4Q8IZF3 695 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 FAM107BQ9H098 131 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 TAF1DQ9H5J8 278 aaPredicted RBP13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 USP21Q9UK80 565 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 SMCHD1A6NHR9 2005 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 PPP1R37O75864 691 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 TRIM37O94972 964 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 PAFAH1B1P43034 410 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms