RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 USP17L15C9J2P7 530 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 USP17L13C9JLJ4 530 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 USP17L11C9JVI0 530 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 USP17L18D6R9N7 530 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 USP17L22D6RA61 530 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 USP17L17D6RBQ6 530 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 USP17L19D6RCP7 530 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 USP17L20D6RJB6 530 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 TBX3O15119 743 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 MYBP10242 640 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 USP17L24Q0WX57 530 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 DPY19L2P1Q6NXN4 242 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 USP17L6PQ6QN14 398 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 IRF2BP2Q7Z5L9 587 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 KRT12Q99456 494 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 MXD3Q9BW11 206 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 PACSIN1Q9BY11 444 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 EHD4Q9H223 541 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 KANSL2Q9H9L4 492 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 USP40Q9NVE5 1235 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 FBXL5Q9UKA1 691 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 PCDHA1Q9Y5I3 950 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 KIF13BQ9NQT8 1826 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 AFPP02771 609 aaKnown RBP14.59□□□□□ -0.07
SRP54-201ENST00000216774 UCHL3P15374 230 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 CCT5P48643 541 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 CACNB1Q02641 598 aaPredicted RBP14.59□□□□□ -0.07
SRP54-201ENST00000216774 PTK2Q05397 1052 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 SPIRE1Q08AE8 756 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 RPS6KA1Q15418 735 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 KNOP1Q1ED39 458 aaKnown RBP14.59□□□□□ -0.07
SRP54-201ENST00000216774 QRICH1Q2TAL8 776 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 EPM2AIP1Q7L775 607 aaPredicted RBP14.59□□□□□ -0.07
SRP54-201ENST00000216774 ETNPPLQ8TBG4 499 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 BCAS4Q8TDM0 211 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 CRYGNQ8WXF5 182 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 IFT81Q8WYA0 676 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 PBKQ96KB5 322 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 CCDC43Q96MW1 224 aaKnown RBP14.59□□□□□ -0.07
SRP54-201ENST00000216774 C8orf37Q96NL8 207 aa14.59□□□□□ -0.07
SRP54-201ENST00000216774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.58□□□□□ -0.08
SRP54-201ENST00000216774 POTEFA5A3E0 1075 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 MPHOSPH10O00566 681 aaKnown RBP14.58□□□□□ -0.08
SRP54-201ENST00000216774 PDXKO00764 312 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 CPP00450 1065 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 FAM153BP0C7A2 387 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 POTEIP0CG38 1075 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 GYS1P13807 737 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 PRKCIP41743 596 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 GIT2Q14161 759 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 FAM153CQ494X1 144 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 POTEGQ6S5H5 508 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 POTEEQ6S8J3 1075 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 SYT2Q8N9I0 419 aaPredicted RBP14.58□□□□□ -0.08
SRP54-201ENST00000216774 DCAF4Q8WV16 495 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 CASKIN2Q8WXE0 1202 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 SPAG5Q96R06 1193 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 EFCC1Q9HA90 598 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 FAM153AQ9UHL3 310 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 DNM3Q9UQ16 869 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 MYH4Q9Y623 1939 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 A0A087WUV0 522 aaPredicted RBP14.58□□□□□ -0.08
SRP54-201ENST00000216774 KLRG2A4D1S0 409 aaPredicted RBP14.58□□□□□ -0.08
SRP54-201ENST00000216774 ZSCAN5CA6NGD5 496 aaPredicted RBP14.58□□□□□ -0.08
SRP54-201ENST00000216774 ZNF233A6NK53 670 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 CALUO43852 315 aaPredicted RBP14.58□□□□□ -0.08
SRP54-201ENST00000216774 ZEB2O60315 1214 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 RPA1P27694 616 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 EXOC3L4Q17RC7 722 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 TTC31Q49AM3 519 aaPredicted RBP14.58□□□□□ -0.08
SRP54-201ENST00000216774 Q4G0T1 1027 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 KDM7AQ6ZMT4 941 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 ZNF571Q7Z3V5 609 aaPredicted RBP14.58□□□□□ -0.08
SRP54-201ENST00000216774 CATSPER3Q86XQ3 398 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 SP8Q8IXZ3 490 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 LTBP4Q8N2S1 1624 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 CERS5Q8N5B7 392 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 ACTRT1Q8TDG2 376 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 MKL1Q969V6 931 aa14.58□□□□□ -0.08
SRP54-201ENST00000216774 CALR3Q96L12 384 aaKnown RBP14.58□□□□□ -0.08
SRP54-201ENST00000216774 ESYT3A0FGR9 886 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 SLC16A3O15427 465 aaKnown RBP14.57□□□□□ -0.08
SRP54-201ENST00000216774 KIF4AO95239 1232 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 KRT14P02533 472 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 XRCC5P13010 732 aaKnown RBP14.57□□□□□ -0.08
SRP54-201ENST00000216774 PON1P27169 355 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 STAT3P40763 770 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 DNA2P51530 1060 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 CASP5P51878 434 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 ARHGAP4P98171 946 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 CUL1Q13616 776 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 BMT2Q1RMZ1 405 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 HHIPL2Q6UWX4 724 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 LRRC57Q8N9N7 239 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 PIK3R5Q8WYR1 880 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 ZHX3Q9H4I2 956 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 TAF1DQ9H5J8 278 aaPredicted RBP14.57□□□□□ -0.08
SRP54-201ENST00000216774 METTL14Q9HCE5 456 aaKnown RBP14.57□□□□□ -0.08
SRP54-201ENST00000216774 NAGPAQ9UK23 515 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 PACSIN2Q9UNF0 486 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms