RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 TMEM105Q8N8V8 129 aa13.39□□□□□ -0.27
MECP2-226ENST00000640414 SYTL5Q8TDW5 730 aaPredicted RBP13.39□□□□□ -0.27
MECP2-226ENST00000640414 C16orf70Q9BSU1 422 aa13.39□□□□□ -0.27
MECP2-226ENST00000640414 MRVI1Q9Y6F6 885 aa13.39□□□□□ -0.27
MECP2-226ENST00000640414 SORBS3O60504 671 aa13.38□□□□□ -0.27
MECP2-226ENST00000640414 RANBP6O60518 1105 aaKnown RBP13.38□□□□□ -0.27
MECP2-226ENST00000640414 CAND2O75155 1236 aa13.38□□□□□ -0.27
MECP2-226ENST00000640414 ITGB1P05556 798 aa13.38□□□□□ -0.27
MECP2-226ENST00000640414 PDHBP11177 359 aa13.38□□□□□ -0.27
MECP2-226ENST00000640414 ATF7P17544 494 aaPredicted RBP13.38□□□□□ -0.27
MECP2-226ENST00000640414 MFAP1P55081 439 aaKnown RBP13.38□□□□□ -0.27
MECP2-226ENST00000640414 HSDL1Q3SXM5 330 aa13.38□□□□□ -0.27
MECP2-226ENST00000640414 MYSM1Q5VVJ2 828 aa13.38□□□□□ -0.27
MECP2-226ENST00000640414 ZNF589Q86UQ0 364 aaPredicted RBP13.38□□□□□ -0.27
MECP2-226ENST00000640414 SPPL3Q8TCT6 385 aa13.38□□□□□ -0.27
MECP2-226ENST00000640414 SUSD6Q92537 303 aa13.38□□□□□ -0.27
MECP2-226ENST00000640414 P2RX5Q93086 422 aa13.38□□□□□ -0.27
MECP2-226ENST00000640414 ZNF689Q96CS4 500 aaPredicted RBP13.38□□□□□ -0.27
MECP2-226ENST00000640414 IWS1Q96ST2 819 aa13.38□□□□□ -0.27
MECP2-226ENST00000640414 RMDN3Q96TC7 470 aa13.38□□□□□ -0.27
MECP2-226ENST00000640414 TMEM47Q9BQJ4 181 aa13.38□□□□□ -0.27
MECP2-226ENST00000640414 KIAA1671Q9BY89 1806 aa13.38□□□□□ -0.27
MECP2-226ENST00000640414 EIF3JO75822 258 aaKnown RBP13.37□□□□□ -0.27
MECP2-226ENST00000640414 SMIM10L2AP0DMW4 78 aa13.37□□□□□ -0.27
MECP2-226ENST00000640414 SMIM10L2BP0DMW5 78 aa13.37□□□□□ -0.27
MECP2-226ENST00000640414 TOP1P11387 765 aaKnown RBP13.37□□□□□ -0.27
MECP2-226ENST00000640414 RBM10P98175 930 aaKnown RBP13.37□□□□□ -0.27
MECP2-226ENST00000640414 PTH1RQ03431 593 aa13.37□□□□□ -0.27
MECP2-226ENST00000640414 SPATA33Q96N06 139 aa13.37□□□□□ -0.27
MECP2-226ENST00000640414 USP26Q9BXU7 913 aa13.37□□□□□ -0.27
MECP2-226ENST00000640414 LSG1Q9H089 658 aaKnown RBP13.37□□□□□ -0.27
MECP2-226ENST00000640414 RNPEPQ9H4A4 650 aa13.37□□□□□ -0.27
MECP2-226ENST00000640414 PCDHGC5Q9Y5F6 944 aa13.37□□□□□ -0.27
MECP2-226ENST00000640414 MRPL42Q9Y6G3 142 aaKnown RBP13.37□□□□□ -0.27
MECP2-226ENST00000640414 GVINP1Q7Z2Y8 2422 aa13.37□□□□□ -0.27
MECP2-226ENST00000640414 FOXP2O15409 715 aa13.36□□□□□ -0.27
MECP2-226ENST00000640414 EIF5BO60841 1220 aaKnown RBP13.36□□□□□ -0.27
MECP2-226ENST00000640414 DGKIO75912 1065 aa13.36□□□□□ -0.27
MECP2-226ENST00000640414 REC8O95072 547 aa13.36□□□□□ -0.27
MECP2-226ENST00000640414 EIF2AK2P19525 551 aaKnown RBP13.36□□□□□ -0.27
MECP2-226ENST00000640414 ZNF543Q08ER8 600 aa13.36□□□□□ -0.27
MECP2-226ENST00000640414 MCTP2Q6DN12 878 aa13.36□□□□□ -0.27
MECP2-226ENST00000640414 ZBTB33Q86T24 672 aa13.36□□□□□ -0.27
MECP2-226ENST00000640414 VN1R2Q8NFZ6 395 aa13.36□□□□□ -0.27
MECP2-226ENST00000640414 ANO2Q9NQ90 1003 aa13.36□□□□□ -0.27
MECP2-226ENST00000640414 H3BRB1 525 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 ENPP3O14638 875 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 NR3C2P08235 984 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 NAALADL2Q58DX5 795 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 FAM26DQ5JW98 314 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 CELF3Q5SZQ8 465 aaKnown RBP13.35□□□□□ -0.27
MECP2-226ENST00000640414 VPS53Q5VIR6 699 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 ARHGEF16Q5VV41 709 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 KLHL23Q8NBE8 558 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 ATP8B4Q8TF62 1192 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 POF1BQ8WVV4 589 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 RMDN1Q96DB5 314 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 MAF1Q9H063 256 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 CPVLQ9H3G5 476 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 TUT1Q9H6E5 874 aaKnown RBP13.35□□□□□ -0.27
MECP2-226ENST00000640414 CACNA1BQ00975 2339 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 DMDP11532 3685 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 CCDC171Q6TFL3 1326 aa13.35□□□□□ -0.27
MECP2-226ENST00000640414 PER2O15055 1255 aa13.34□□□□□ -0.27
MECP2-226ENST00000640414 GGPS1O95749 300 aa13.34□□□□□ -0.27
MECP2-226ENST00000640414 CHRNA1P02708 482 aa13.34□□□□□ -0.27
MECP2-226ENST00000640414 SNHG28P0DPA3 235 aa13.34□□□□□ -0.27
MECP2-226ENST00000640414 GHRP10912 638 aa13.34□□□□□ -0.27
MECP2-226ENST00000640414 SP100P23497 879 aaPredicted RBP13.34□□□□□ -0.27
MECP2-226ENST00000640414 SP2Q02086 613 aa13.34□□□□□ -0.27
MECP2-226ENST00000640414 KREMEN2Q8NCW0 462 aa13.34□□□□□ -0.27
MECP2-226ENST00000640414 MAP4K1Q92918 833 aa13.34□□□□□ -0.27
MECP2-226ENST00000640414 TLE6Q9H808 572 aa13.34□□□□□ -0.27
MECP2-226ENST00000640414 PXMP2Q9NR77 195 aa13.34□□□□□ -0.27
MECP2-226ENST00000640414 TSHZ2Q9NRE2 1034 aa13.34□□□□□ -0.27
MECP2-226ENST00000640414 SETD4Q9NVD3 440 aa13.34□□□□□ -0.27
MECP2-226ENST00000640414 ABCB11O95342 1321 aa13.34□□□□□ -0.27
MECP2-226ENST00000640414 PLXNA4Q9HCM2 1894 aa13.33□□□□□ -0.27
MECP2-226ENST00000640414 ORC4O43929 436 aa13.33□□□□□ -0.28
MECP2-226ENST00000640414 BRD1O95696 1058 aa13.33□□□□□ -0.28
MECP2-226ENST00000640414 LGALS2P05162 132 aa13.33□□□□□ -0.28
MECP2-226ENST00000640414 FGRP09769 529 aa13.33□□□□□ -0.28
MECP2-226ENST00000640414 GOLGA8HP0CJ92 632 aa13.33□□□□□ -0.28
MECP2-226ENST00000640414 HSPD1P10809 573 aaKnown RBP13.33□□□□□ -0.28
MECP2-226ENST00000640414 UBA1P22314 1058 aaKnown RBP13.33□□□□□ -0.28
MECP2-226ENST00000640414 CDC37Q16543 378 aaPredicted RBP13.33□□□□□ -0.28
MECP2-226ENST00000640414 ASTLQ6HA08 431 aaPredicted RBP13.33□□□□□ -0.28
MECP2-226ENST00000640414 DGLUCYQ7Z3D6 616 aa13.33□□□□□ -0.28
MECP2-226ENST00000640414 MCF2L2Q86YR7 1114 aa13.33□□□□□ -0.28
MECP2-226ENST00000640414 CMTR2Q8IYT2 770 aaKnown RBP13.33□□□□□ -0.28
MECP2-226ENST00000640414 C22orf23Q9BZE7 217 aa13.33□□□□□ -0.28
MECP2-226ENST00000640414 EHMT1Q9H9B1 1298 aa13.33□□□□□ -0.28
MECP2-226ENST00000640414 ANAPC4Q9UJX5 808 aa13.33□□□□□ -0.28
MECP2-226ENST00000640414 TTC3P53804 2025 aa13.33□□□□□ -0.28
MECP2-226ENST00000640414 EPB41L2O43491 1005 aaKnown RBP13.32□□□□□ -0.28
MECP2-226ENST00000640414 MTMR3Q13615 1198 aa13.32□□□□□ -0.28
MECP2-226ENST00000640414 LPIN1Q14693 890 aa13.32□□□□□ -0.28
MECP2-226ENST00000640414 UBALD2Q8IYN6 164 aa13.32□□□□□ -0.28
MECP2-226ENST00000640414 CRIPAKQ8N1N5 446 aa13.32□□□□□ -0.28
MECP2-226ENST00000640414 CNTNAP3BQ96NU0 1288 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms