RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 TTYH3Q9C0H2 523 aa16.75■□□□□ 0.27
TRIM3-215ENST00000639856 WDR90Q96KV7 1748 aa16.75■□□□□ 0.27
TRIM3-215ENST00000639856 POTEB3A0JP26 581 aa16.75■□□□□ 0.27
TRIM3-215ENST00000639856 POTECB2RU33 542 aa16.75■□□□□ 0.27
TRIM3-215ENST00000639856 TBX3O15119 743 aa16.75■□□□□ 0.27
TRIM3-215ENST00000639856 LRRC63Q05C16 580 aa16.75■□□□□ 0.27
TRIM3-215ENST00000639856 TSR1Q2NL82 804 aaKnown RBP16.75■□□□□ 0.27
TRIM3-215ENST00000639856 NOL9Q5SY16 702 aaKnown RBP16.75■□□□□ 0.27
TRIM3-215ENST00000639856 POTEBQ6S5H4 581 aa16.75■□□□□ 0.27
TRIM3-215ENST00000639856 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.75■□□□□ 0.27
TRIM3-215ENST00000639856 ERGIC2Q96RQ1 377 aa16.75■□□□□ 0.27
TRIM3-215ENST00000639856 EPN1Q9Y6I3 576 aaPredicted RBP16.75■□□□□ 0.27
TRIM3-215ENST00000639856 RBBP6Q7Z6E9 1792 aaKnown RBP16.74■□□□□ 0.27
TRIM3-215ENST00000639856 PAPPA2Q9BXP8 1791 aa16.74■□□□□ 0.27
TRIM3-215ENST00000639856 VWA5AO00534 786 aa16.74■□□□□ 0.27
TRIM3-215ENST00000639856 MED24O75448 989 aa16.74■□□□□ 0.27
TRIM3-215ENST00000639856 FGFR1OPO95684 399 aaKnown RBP16.74■□□□□ 0.27
TRIM3-215ENST00000639856 H2AFXP16104 143 aaPredicted RBP16.74■□□□□ 0.27
TRIM3-215ENST00000639856 TRIM21P19474 475 aaKnown RBP16.74■□□□□ 0.27
TRIM3-215ENST00000639856 VGLL4Q14135 290 aa16.74■□□□□ 0.27
TRIM3-215ENST00000639856 NCAPH2Q6IBW4 605 aa16.74■□□□□ 0.27
TRIM3-215ENST00000639856 FOXR2Q6PJQ5 311 aa16.74■□□□□ 0.27
TRIM3-215ENST00000639856 SULF1Q8IWU6 871 aa16.74■□□□□ 0.27
TRIM3-215ENST00000639856 VAV3Q9UKW4 847 aa16.74■□□□□ 0.27
TRIM3-215ENST00000639856 KIAA1024Q9UPX6 916 aa16.74■□□□□ 0.27
TRIM3-215ENST00000639856 RASSF10A6NK89 507 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 NDUFA10O95299 355 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 WDR59Q6PJI9 974 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 TEX2Q8IWB9 1127 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 CNKSR2Q8WXI2 1034 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 C12orf42Q96LP6 360 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 BMP2KQ9NSY1 1161 aaPredicted RBP16.73■□□□□ 0.27
TRIM3-215ENST00000639856 AFG3L2Q9Y4W6 797 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 SNCAIPQ9Y6H5 919 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 POTEFA5A3E0 1075 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 E9PMD0 336 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 POTEIP0CG38 1075 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 PPP2R3AQ06190 1150 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 COASYQ13057 564 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 MEA1Q16626 185 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 FIGNQ5HY92 759 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 ZNF569Q5MCW4 686 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 FKBP15Q5T1M5 1219 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 POTEGQ6S5H5 508 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 POTEEQ6S8J3 1075 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 KRT26Q7Z3Y9 468 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 IL31RAQ8NI17 732 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 FAM20AQ96MK3 541 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 AGPAT5Q9NUQ2 364 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 DDX41Q9UJV9 622 aaKnown RBP16.73■□□□□ 0.27
TRIM3-215ENST00000639856 PTPRFP10586 1907 aa16.73■□□□□ 0.27
TRIM3-215ENST00000639856 NKRFO15226 690 aaKnown RBP eCLIP16.72■□□□□ 0.27
TRIM3-215ENST00000639856 ZBED4O75132 1171 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 ARHGAP25P42331 645 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 PANK4Q9NVE7 773 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 MYO1AQ9UBC5 1043 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 RIPK3Q9Y572 518 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 CTDP1Q9Y5B0 961 aaPredicted RBP16.72■□□□□ 0.27
TRIM3-215ENST00000639856 SPDYE4A6NLX3 237 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 C19orf81C9J6K1 198 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 EML1O00423 815 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 KLK7P49862 253 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 ZBED6P86452 979 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 VWA3BQ502W6 1294 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 CEP55Q53EZ4 464 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 ILDR2Q71H61 639 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 CATSPER3Q86XQ3 398 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 MYOCDQ8IZQ8 938 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 GLIS3Q8NEA6 775 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 IQCDQ96DY2 449 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 EHMT1Q9H9B1 1298 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 OGFRQ9NZT2 677 aa16.72■□□□□ 0.27
TRIM3-215ENST00000639856 A0A1W2PQJ5 194 aa16.71■□□□□ 0.27
TRIM3-215ENST00000639856 ABL1P00519 1130 aa16.71■□□□□ 0.27
TRIM3-215ENST00000639856 SSBP05455 408 aaKnown RBP eCLIP16.71■□□□□ 0.27
TRIM3-215ENST00000639856 PLA2G4BP0C869 781 aa16.71■□□□□ 0.27
TRIM3-215ENST00000639856 SPATA31C1P0DKV0 1188 aa16.71■□□□□ 0.27
TRIM3-215ENST00000639856 ARP10275 920 aa16.71■□□□□ 0.27
TRIM3-215ENST00000639856 CBX1P83916 185 aa16.71■□□□□ 0.27
TRIM3-215ENST00000639856 MAN2A1Q16706 1144 aa16.71■□□□□ 0.27
TRIM3-215ENST00000639856 FAM26FQ5R3K3 315 aa16.71■□□□□ 0.27
TRIM3-215ENST00000639856 HAUS3Q68CZ6 603 aa16.71■□□□□ 0.27
TRIM3-215ENST00000639856 LRRC55Q6ZSA7 311 aa16.71■□□□□ 0.27
TRIM3-215ENST00000639856 REPS2Q8NFH8 660 aa16.71■□□□□ 0.27
TRIM3-215ENST00000639856 SYTL5Q8TDW5 730 aaPredicted RBP16.71■□□□□ 0.27
TRIM3-215ENST00000639856 PCMTD1Q96MG8 357 aaPredicted RBP16.71■□□□□ 0.27
TRIM3-215ENST00000639856 TRERF1Q96PN7 1200 aa16.71■□□□□ 0.27
TRIM3-215ENST00000639856 TSG101Q99816 390 aa16.71■□□□□ 0.27
TRIM3-215ENST00000639856 NDST4Q9H3R1 872 aa16.71■□□□□ 0.27
TRIM3-215ENST00000639856 REXO2Q9Y3B8 237 aaKnown RBP16.71■□□□□ 0.27
TRIM3-215ENST00000639856 RPTORQ8N122 1335 aa16.71■□□□□ 0.27
TRIM3-215ENST00000639856 MEIS1O00470 390 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 RPS6P62753 249 aaKnown RBP16.7■□□□□ 0.26
TRIM3-215ENST00000639856 CYP4A11Q02928 519 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 TUBB2AQ13885 445 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 LRRC41Q15345 812 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 DPY19L2Q6NUT2 758 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 MOB2Q70IA6 237 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 MCF2L2Q86YR7 1114 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 CCDC65Q8IXS2 484 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms