RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 PDCLQ13371 301 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 DYMQ7RTS9 669 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 C3orf20Q8ND61 904 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 PACSIN1Q9BY11 444 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 ZNF287Q9HBT7 754 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 STX8Q9UNK0 236 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 HMGB1P1B2RPK0 211 aaPredicted RBP14.39□□□□□ -0.11
SKP2-209ENST00000620197 RAD51CO43502 376 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 PAEPP09466 180 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 HOXD13P35453 343 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 ERVK-9P63128 1117 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 NAA35Q5VZE5 725 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 CALR3Q96L12 384 aaKnown RBP14.39□□□□□ -0.11
SKP2-209ENST00000620197 TXLNGYQ9BZA5 131 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 ANXA13P27216 316 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 USP11P51784 963 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 ADCY7P51828 1080 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 DDR1Q08345 913 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 CCDC181Q5TID7 509 aa14.39□□□□□ -0.11
SKP2-209ENST00000620197 MEFVO15553 781 aaPredicted RBP14.38□□□□□ -0.11
SKP2-209ENST00000620197 GSCP56915 257 aaPredicted RBP14.38□□□□□ -0.11
SKP2-209ENST00000620197 POU5F1Q01860 360 aaKnown RBP14.38□□□□□ -0.11
SKP2-209ENST00000620197 GUCY2DQ02846 1103 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 LRRC41Q15345 812 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 ASPRV1Q53RT3 343 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 ARSHQ5FYA8 562 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 B4GALNT4Q76KP1 1039 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 MAPKAPK5Q8IW41 473 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 TAF1DQ9H5J8 278 aaPredicted RBP14.38□□□□□ -0.11
SKP2-209ENST00000620197 KCNMB3Q9NPA1 279 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 A1CFQ9NQ94 594 aaKnown RBP14.38□□□□□ -0.11
SKP2-209ENST00000620197 JAG2Q9Y219 1238 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 CYP3A7-CYP3A51PA0A087WV96 503 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 ESYT3A0FGR9 886 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 SHTN1A0MZ66 631 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 PPP1R37O75864 691 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 CYP3A7P24462 503 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 HNRNPH1P31943 449 aaKnown RBP14.38□□□□□ -0.11
SKP2-209ENST00000620197 MDH1P40925 334 aaKnown RBP14.38□□□□□ -0.11
SKP2-209ENST00000620197 MATR3P43243 847 aaKnown RBP eCLIP14.38□□□□□ -0.116e-7■■■■□ 23.7
SKP2-209ENST00000620197 TMEM266Q2M3C6 531 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 AMIGO3Q86WK7 504 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 SNX29Q8TEQ0 813 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 TSG101Q99816 390 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 SIX2Q9NPC8 291 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 MTMR4Q9NYA4 1195 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 SEC63Q9UGP8 760 aaKnown RBP14.38□□□□□ -0.11
SKP2-209ENST00000620197 SWAP70Q9UH65 585 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 TRAF3IP3Q9Y228 551 aa14.38□□□□□ -0.11
SKP2-209ENST00000620197 LIG3P49916 1009 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 SLC12A3P55017 1021 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 SPIRE1Q08AE8 756 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 PPP4R3CPQ6ZMV5 832 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 MICALL1Q8N3F8 863 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 TBC1D5Q92609 795 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 LSM14BQ9BX40 385 aaKnown RBP14.37□□□□□ -0.11
SKP2-209ENST00000620197 MYO3BQ8WXR4 1341 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 PITPNM2Q9BZ72 1349 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 FTCDO95954 541 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 NR1D1P20393 614 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 CUL1Q13616 776 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 PLCB4Q15147 1175 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 SKIDA1Q1XH10 827 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 ZNF571Q7Z3V5 609 aaPredicted RBP14.37□□□□□ -0.11
SKP2-209ENST00000620197 RAB34Q9BZG1 259 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 PANK4Q9NVE7 773 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 SAP30BPQ9UHR5 308 aaKnown RBP14.37□□□□□ -0.11
SKP2-209ENST00000620197 TTC7AQ9ULT0 858 aaPredicted RBP14.37□□□□□ -0.11
SKP2-209ENST00000620197 A0A0A6YYK5 440 aaPredicted RBP14.37□□□□□ -0.11
SKP2-209ENST00000620197 C5orf60A6NFR6 353 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 RPS6KA4O75676 772 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 FAM107AO95990 144 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 BTDP43251 543 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 GRAPQ13588 217 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 MCTP2Q6DN12 878 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 MYCBPAPQ8TBZ2 947 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 GRAPLQ8TC17 118 aaPredicted RBP14.37□□□□□ -0.11
SKP2-209ENST00000620197 ZNF473Q8WTR7 871 aaKnown RBP14.37□□□□□ -0.11
SKP2-209ENST00000620197 KRT12Q99456 494 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 NCAPGQ9BPX3 1015 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 JMJD4Q9H9V9 463 aa14.37□□□□□ -0.11
SKP2-209ENST00000620197 KDM3AQ9Y4C1 1321 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 LOXHD1Q8IVV2 1947 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 POLR2FP61218 127 aaKnown RBP14.36□□□□□ -0.11
SKP2-209ENST00000620197 GUCY1A3Q02108 690 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 BMT2Q1RMZ1 405 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 FAM26FQ5R3K3 315 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 CFAP58Q5T655 872 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 SOGA3Q5TF21 947 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 KRT79Q5XKE5 535 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 TTC19Q6DKK2 380 aaPredicted RBP14.36□□□□□ -0.11
SKP2-209ENST00000620197 RBM46Q8TBY0 533 aaKnown RBP14.36□□□□□ -0.11
SKP2-209ENST00000620197 PBKQ96KB5 322 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 SYT11Q9BT88 431 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 NEUROG2Q9H2A3 272 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 KIF4AO95239 1232 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 GCFC2P16383 781 aaKnown RBP14.36□□□□□ -0.11
SKP2-209ENST00000620197 CYP11B2P19099 503 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 HSD17B3P37058 310 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 PTK2Q05397 1052 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms