RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 DRP2Q13474 957 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 RWDD4Q6NW29 188 aaKnown RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 TTC30AQ86WT1 665 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 FSD1LQ9BXM9 530 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 CNOT10Q9H9A5 744 aaKnown RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 EFCAB6Q5THR3 1501 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 GOLGA8SH3BPF8 625 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 IPO5O00410 1097 aaKnown RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 PSMD2Q13200 908 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 MAN2A1Q16706 1144 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 TRIM67Q6ZTA4 783 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 ZBTB33Q86T24 672 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 CFAP36Q96G28 342 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 NLRP4Q96MN2 994 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 UPF3AQ9H1J1 476 aaKnown RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 KRT82Q9NSB4 513 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 MAGED2Q9UNF1 606 aaPredicted RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 H3BRJ5 948 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 DYNLT1P63172 113 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 NAA35Q5VZE5 725 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 TRIM59Q8IWR1 403 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 TRIM4Q9C037 500 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 UBE2TQ9NPD8 197 aaPredicted RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 SRGAP2CP0DJJ0 459 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 ADD1P35611 737 aaKnown RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 OCRLQ01968 901 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 SLC10A4Q96EP9 437 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 TRIM45Q9H8W5 580 aaPredicted RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 FNDC3AQ9Y2H6 1198 aaKnown RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 CDC25BP30305 580 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 NEUROG2Q9H2A3 272 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 SPHKAPQ2M3C7 1700 aa12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 DSTYKQ6XUX3 929 aa12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 FAM160B2Q86V87 743 aa12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 ZBTB18Q99592 522 aa12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 TPX2Q9ULW0 747 aaKnown RBP12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 TOM1L1O75674 476 aa12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 TJP3O95049 919 aa12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 RXRBP28702 533 aa12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 TMED2Q15363 201 aa12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 TAF1BQ53T94 588 aaPredicted RBP12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 ZNF658Q5TYW1 1059 aaPredicted RBP12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 KRT39Q6A163 491 aa12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 SZRD1Q7Z422 152 aa12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 CDC26Q8NHZ8 85 aa12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 BCAS4Q8TDM0 211 aa12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 VPS39Q96JC1 886 aa12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 CALR3Q96L12 384 aaKnown RBP12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 RGS12O14924 1447 aa12.02□□□□□ -0.48
CCDC144B-208ENST00000618081 IQANK1A0A1B0GTG1 560 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 LRRD1A4D1F6 860 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 DDIT3P35638 169 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 IL6STP40189 918 aaPredicted RBP12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 KIAA1755Q5JYT7 1200 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 DDX17Q92841 729 aaKnown RBP12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 BAZ2BQ9UIF8 2168 aaKnown RBP12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 BTBD18B2RXH4 712 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 K7ERI5 159 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 TESK2Q96S53 571 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 NNMTP40261 264 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 CEP19Q96LK0 163 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 GREM2Q9H772 168 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 FIS1Q9Y3D6 152 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 KIF19Q2TAC6 998 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 LMBRD1Q9NUN5 540 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 POLIQ9UNA4 740 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 FARP1Q9Y4F1 1045 aaPredicted RBP12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 ZBED1O96006 694 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 SLMAPQ14BN4 828 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 RASIP1Q5U651 963 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 RTKN2Q8IZC4 609 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 KIFC3Q9BVG8 833 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 ABCF3Q9NUQ8 709 aa12.02□□□□□ -0.49
CCDC144B-208ENST00000618081 MT-ND3P03897 115 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 P2RX5Q93086 422 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 EXOC1LA0A1B0GW35 172 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 OCM2P0CE71 109 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 OCMP0CE72 109 aaPredicted RBP12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 EPHB4P54760 987 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 LDHAP00338 332 aaKnown RBP12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 ACBD5Q5T8D3 534 aaPredicted RBP12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 KSR1Q8IVT5 923 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 HACD3Q9P035 362 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 RNF14Q9UBS8 474 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 PALD1Q9ULE6 856 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 CDC42BPBQ9Y5S2 1711 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 SERPING1P05155 500 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 MARK3P27448 753 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 PAPOLAP51003 745 aaKnown RBP12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 USP28Q96RU2 1077 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 PACSIN2Q9UNF0 486 aaPredicted RBP12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 QRICH2Q9H0J4 1663 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 CHD1O14646 1710 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 SNX2O60749 519 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 EFCAB14O75071 495 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 SCRN1Q12765 414 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 MTERF2Q49AM1 385 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 MAGEB5Q9BZ81 275 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 PCDHA7Q9UN72 937 aa12.01□□□□□ -0.49
CCDC144B-208ENST00000618081 GCKP35557 465 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms