RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 ROPN1BQ9BZX4 212 aaPredicted RBP11.08□□□□□ -0.64
CUL4A-212ENST00000617546 VCPKMTQ9H867 229 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 ROPN1Q9HAT0 212 aaPredicted RBP11.08□□□□□ -0.64
CUL4A-212ENST00000617546 FGGP02679 453 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 SLC12A2P55011 1212 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 PTPN12Q05209 780 aaKnown RBP11.08□□□□□ -0.64
CUL4A-212ENST00000617546 NAA35Q5VZE5 725 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 ANO5Q75V66 913 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 KCNB2Q92953 911 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 NT5C1BQ96P26 610 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 TRIM15Q9C019 465 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 PSTPIP2Q9H939 334 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 TMOD4Q9NZQ9 345 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 USP17L12C9JPN9 530 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 USP17L21D6R901 530 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 E7ENQ6 273 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 SERPINB4P48594 390 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 KPNA2P52292 529 aaKnown RBP11.08□□□□□ -0.64
CUL4A-212ENST00000617546 ABTB1Q969K4 478 aaPredicted RBP11.08□□□□□ -0.64
CUL4A-212ENST00000617546 NDE1Q9NXR1 346 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 NDUFA13Q9P0J0 144 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 L1RE1Q9UN81 338 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 TTC26A0AVF1 554 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 RPS6KA5O75582 802 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 IFNB1P01574 187 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 GHRP10912 638 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 PYGBP11216 843 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 RFC4P35249 363 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 GEN1Q17RS7 908 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 FSCBQ5H9T9 825 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 RSRC2Q7L4I2 434 aaKnown RBP11.08□□□□□ -0.64
CUL4A-212ENST00000617546 EPM2AIP1Q7L775 607 aaPredicted RBP11.08□□□□□ -0.64
CUL4A-212ENST00000617546 SPATA21Q7Z572 469 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 OSBP2Q969R2 916 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 CYFIP2Q96F07 1278 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 CCDC97Q96F63 343 aaPredicted RBP11.08□□□□□ -0.64
CUL4A-212ENST00000617546 USP15Q9Y4E8 981 aaPredicted RBP11.08□□□□□ -0.64
CUL4A-212ENST00000617546 CCT8L1PA6NM43 557 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 SRRM3A6NNA2 597 aaPredicted RBP11.07□□□□□ -0.64
CUL4A-212ENST00000617546 GSTA2P09210 222 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 CA4P22748 312 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 PSMD6Q15008 389 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 KRT80Q6KB66 452 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 SHC4Q6S5L8 630 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 TRMT10CQ7L0Y3 403 aaKnown RBP11.07□□□□□ -0.64
CUL4A-212ENST00000617546 ZNF653Q96CK0 615 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 FOXP3Q9BZS1 431 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 AZI2Q9H6S1 392 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 ADD3Q9UEY8 706 aaKnown RBP11.07□□□□□ -0.64
CUL4A-212ENST00000617546 ARL1P40616 181 aaPredicted RBP11.07□□□□□ -0.64
CUL4A-212ENST00000617546 CYP2J2P51589 502 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 EXOSC10Q01780 885 aaKnown RBP11.07□□□□□ -0.64
CUL4A-212ENST00000617546 NUDCD1Q96RS6 583 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 KIFC3Q9BVG8 833 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 ETNK1Q9HBU6 452 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 TMEM51Q9NW97 253 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 PDP2Q9P2J9 529 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 PTPN22Q9Y2R2 807 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 DAB2IPQ5VWQ8 1189 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 SGMS1Q86VZ5 419 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 CRLF3Q8IUI8 442 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 XPO6Q96QU8 1125 aaKnown RBP11.07□□□□□ -0.64
CUL4A-212ENST00000617546 MMS19Q96T76 1030 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 ATP6V0A4Q9HBG4 840 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 RAB21Q9UL25 225 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 ZBTB22O15209 634 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 PLCG1P19174 1290 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 SLC1A4P43007 532 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 GUCY1A3Q02108 690 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 NR5A1Q13285 461 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 TRIML2Q8N7C3 387 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 LZICQ8WZA0 190 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 AP1M1Q9BXS5 423 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 EPC1Q9H2F5 836 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 EMILIN3Q9NT22 766 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 USP6P35125 1406 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 NLRP1Q9C000 1473 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 LRRC7Q96NW7 1537 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 CCDC22O60826 627 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 STAT4Q14765 748 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 TGS1Q96RS0 853 aaKnown RBP11.07□□□□□ -0.64
CUL4A-212ENST00000617546 TRAIPQ9BWF2 469 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 KDM4CQ9H3R0 1056 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 IL1RAPL1Q9NZN1 696 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 GCNT4Q9P109 453 aa11.07□□□□□ -0.64
CUL4A-212ENST00000617546 SMG5Q9UPR3 1016 aaKnown RBP11.07□□□□□ -0.64
CUL4A-212ENST00000617546 UBN2Q6ZU65 1347 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 PITPNM2Q9BZ72 1349 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 hCG_1642624A0A1W2PR95 340 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 RCN2Q14257 317 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 CASC4Q6P4E1 433 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 ADAT2Q7Z6V5 191 aaKnown RBP11.06□□□□□ -0.64
CUL4A-212ENST00000617546 METTL16Q86W50 562 aaKnown RBP11.06□□□□□ -0.64
CUL4A-212ENST00000617546 ENGASEQ8NFI3 743 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 GDAP1Q8TB36 358 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 LRRC53A6NM62 1247 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 GAS7O60861 476 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 LRRC24Q50LG9 513 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 PRR16Q569H4 304 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 GPATCH4Q5T3I0 446 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms