RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 KCNV1Q6PIU1 500 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 FAM71BQ8TC56 605 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 CNOT6LQ96LI5 555 aaKnown RBP12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 BCAS3Q9H6U6 928 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 LZTFL1Q9NQ48 299 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 HERC5Q9UII4 1024 aaKnown RBP12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 HDAC9Q9UKV0 1011 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 ZNRF3Q9ULT6 936 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 SCP2P22307 547 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 CCNE1P24864 410 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 CASP8Q14790 479 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 RPAINQ86UA6 219 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 RAB34Q9BZG1 259 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 TAOK3Q9H2K8 898 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 ABHD10Q9NUJ1 306 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 STK17AQ9UEE5 414 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 TTC26A0AVF1 554 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 LGALS16A8MUM7 142 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 ERLIN1O75477 346 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 CFBP00751 764 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 PSMC6P62333 389 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 AMPD3Q01432 767 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 SPAG1Q07617 926 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 SPIRE1Q08AE8 756 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 PPP2R5AQ15172 486 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 UNC13DQ70J99 1090 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 MB21D1Q8N884 522 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 ETNPPLQ8TBG4 499 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 PANX2Q96RD6 677 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 TUBGCP2Q9BSJ2 902 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 LTBP3Q9NS15 1303 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 SPDYE3A6NKU9 549 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 GCFC2P16383 781 aaKnown RBP12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 KRT9P35527 623 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 CYP4A11Q02928 519 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 NCAPH2Q6IBW4 605 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 CNNM4Q6P4Q7 775 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 ZNF507Q8TCN5 953 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 DNAJC19Q96DA6 116 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 DHTKD1Q96HY7 919 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 CHP1Q99653 195 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 JPH2Q9BR39 696 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 THAP9Q9H5L6 903 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 TFR2Q9UP52 801 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 TMX2Q9Y320 296 aa12.62□□□□□ -0.39
PCDHGA9-202ENST00000616887 ITIH6Q6UXX5 1313 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 RASSF10A6NK89 507 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 RHOXF2BP0C7M4 288 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 SRGAP1Q7Z6B7 1085 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 AGBL3Q8NEM8 1001 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 JDP2Q8WYK2 163 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 RHOXF2Q9BQY4 288 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 ARHGEF10LQ9HCE6 1279 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 AGPAT5Q9NUQ2 364 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 FZD1Q9UP38 647 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 PCNTO95613 3336 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 NFKBIEO00221 500 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 COASYQ13057 564 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 MIIPQ5JXC2 388 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 BTNL9Q6UXG8 535 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 MAGEC2Q9UBF1 373 aaPredicted RBP12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 ADGRG1Q9Y653 693 aa12.61□□□□□ -0.39
PCDHGA9-202ENST00000616887 FER1L6Q2WGJ9 1857 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 MSH4O15457 936 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 EEF1GP26641 437 aaKnown RBP12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 SREBF1P36956 1147 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 USP8P40818 1118 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 CCT5P48643 541 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 USP11P51784 963 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 EHHADHQ08426 723 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 AP3B2Q13367 1082 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 LRCH2Q5VUJ6 765 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 ARHGAP27Q6ZUM4 889 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 CATSPER3Q86XQ3 398 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 CNGA4Q8IV77 575 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 NELFCDQ8IXH7 590 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 CCDC155Q8N6L0 562 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 CCDC47Q96A33 483 aaKnown RBP12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 MBOAT7Q96N66 472 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 FAM107BQ9H098 131 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 MYOZ2Q9NPC6 264 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 PGAP2Q9UHJ9 254 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 RAB21Q9UL25 225 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 COL2A1P02458 1487 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 CYP3A7-CYP3A51PA0A087WV96 503 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 LRRIQ3A6PVS8 624 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 RNF40O75150 1001 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 PLA2G4BP0C869 781 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 CYP3A7P24462 503 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 CAP2P40123 477 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 MTIF2P46199 727 aaKnown RBP12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 VSNL1P62760 191 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 RASSF7Q02833 373 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 PABPC4Q13310 644 aaKnown RBP eCLIP12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 CENPPQ6IPU0 288 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 SAMD7Q7Z3H4 446 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 GPBP1Q86WP2 473 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 AFAP1L1Q8TED9 768 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 ZHX3Q9H4I2 956 aa12.6□□□□□ -0.39
PCDHGA9-202ENST00000616887 FAM169AQ9Y6X4 670 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms