RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 POMGNT1Q8WZA1 660 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 MIS12Q9H081 205 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 UBE2TQ9NPD8 197 aaPredicted RBP20.35■□□□□ 0.85
SPAST-203ENST00000615843 H0YCG3 227 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 CPP00450 1065 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 RWDD2BP57060 319 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 CHRNDQ07001 517 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 TRAPPC3LQ5T215 181 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 ETNK1Q9HBU6 452 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 IGSF1Q8N6C5 1336 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 EIF3HO15372 352 aaKnown RBP eCLIP20.34■□□□□ 0.85
SPAST-203ENST00000615843 GCFC2P16383 781 aaKnown RBP20.34■□□□□ 0.85
SPAST-203ENST00000615843 DMP1Q13316 513 aaPredicted RBP20.34■□□□□ 0.85
SPAST-203ENST00000615843 EIF4E1BA6NMX2 242 aaKnown RBP20.34■□□□□ 0.85
SPAST-203ENST00000615843 FOSP01100 380 aaPredicted RBP20.34■□□□□ 0.85
SPAST-203ENST00000615843 POLR2MP0CAP2 368 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 ECE1P42892 770 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 LCORLQ8N3X6 602 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 TRAIPQ9BWF2 469 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 GINS2Q9Y248 185 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 ZBED4O75132 1171 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 PRCPP42785 496 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 BASP1P80723 227 aaKnown RBP20.34■□□□□ 0.85
SPAST-203ENST00000615843 GABPAQ06546 454 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 CHURC1Q8WUH1 139 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 EPN3Q9H201 632 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 ZFP69BQ9UJL9 534 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 PCDHB4Q9Y5E5 795 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 ARHGAP31Q2M1Z3 1444 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
SPAST-203ENST00000615843 RASA4BC9J798 803 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 RASA4O43374 803 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 CCDC24Q8N4L8 307 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 ORAI2Q96SN7 254 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 USP40Q9NVE5 1235 aa20.34■□□□□ 0.85
SPAST-203ENST00000615843 MFSD14BQ5SR56 506 aa20.33■□□□□ 0.85
SPAST-203ENST00000615843 ATG16L1Q676U5 607 aa20.33■□□□□ 0.85
SPAST-203ENST00000615843 TNNC2P02585 160 aa20.33■□□□□ 0.85
SPAST-203ENST00000615843 ELF1P32519 619 aa20.33■□□□□ 0.85
SPAST-203ENST00000615843 YARSP54577 528 aaKnown RBP20.33■□□□□ 0.85
SPAST-203ENST00000615843 CENPUQ71F23 418 aa20.33■□□□□ 0.85
SPAST-203ENST00000615843 SPATA4Q8NEY3 305 aa20.33■□□□□ 0.85
SPAST-203ENST00000615843 SERPINI1Q99574 410 aa20.33■□□□□ 0.85
SPAST-203ENST00000615843 SMYD2Q9NRG4 433 aa20.33■□□□□ 0.85
SPAST-203ENST00000615843 PRDM15P57071 1507 aaPredicted RBP20.33■□□□□ 0.85
SPAST-203ENST00000615843 RAD23BP54727 409 aa20.33■□□□□ 0.84
SPAST-203ENST00000615843 LRRC37BQ96QE4 947 aa20.33■□□□□ 0.84
SPAST-203ENST00000615843 SYNGAP1Q96PV0 1343 aa20.33■□□□□ 0.84
SPAST-203ENST00000615843 RASSF10A6NK89 507 aa20.33■□□□□ 0.84
SPAST-203ENST00000615843 BBS9Q3SYG4 887 aa20.33■□□□□ 0.84
SPAST-203ENST00000615843 DDX47Q9H0S4 455 aaKnown RBP20.33■□□□□ 0.84
SPAST-203ENST00000615843 MRPL47Q9HD33 250 aaKnown RBP20.33■□□□□ 0.84
SPAST-203ENST00000615843 MCF2LO15068 1137 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 NCF2P19878 526 aaPredicted RBP20.32■□□□□ 0.84
SPAST-203ENST00000615843 SRRM1Q8IYB3 904 aaKnown RBP20.32■□□□□ 0.84
SPAST-203ENST00000615843 ZNF473Q8WTR7 871 aaKnown RBP20.32■□□□□ 0.84
SPAST-203ENST00000615843 IQANK1A0A1B0GTG1 560 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 MDH1P40925 334 aaKnown RBP20.32■□□□□ 0.84
SPAST-203ENST00000615843 PPP4R3CPQ6ZMV5 832 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 PDZD4Q76G19 769 aaPredicted RBP20.32■□□□□ 0.84
SPAST-203ENST00000615843 RUBCNQ92622 972 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 MLXIPLQ9NP71 852 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 STX1BP61266 288 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 HIPK4Q8NE63 616 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 ALDH8A1Q9H2A2 487 aaPredicted RBP20.32■□□□□ 0.84
SPAST-203ENST00000615843 ATG3Q9NT62 314 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 HAUS2Q9NVX0 235 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 PPARGC1AQ9UBK2 798 aaKnown RBP20.32■□□□□ 0.84
SPAST-203ENST00000615843 BAG5Q9UL15 447 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 STK36Q9NRP7 1315 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 MIF4GDA9UHW6 222 aaKnown RBP20.32■□□□□ 0.84
SPAST-203ENST00000615843 DYNLT1P63172 113 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 RAPH1Q70E73 1250 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 PYROXD1Q8WU10 500 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 HDAC11Q96DB2 347 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 MMS19Q96T76 1030 aa20.32■□□□□ 0.84
SPAST-203ENST00000615843 IPO5O00410 1097 aaKnown RBP20.31■□□□□ 0.84
SPAST-203ENST00000615843 EPM2AIP1Q7L775 607 aaPredicted RBP20.31■□□□□ 0.84
SPAST-203ENST00000615843 TMOD4Q9NZQ9 345 aa20.31■□□□□ 0.84
SPAST-203ENST00000615843 DISP1Q96F81 1524 aa20.31■□□□□ 0.84
SPAST-203ENST00000615843 PLA2G4BP0C869 781 aa20.31■□□□□ 0.84
SPAST-203ENST00000615843 TESPA1A2RU30 521 aaPredicted RBP20.31■□□□□ 0.84
SPAST-203ENST00000615843 DYNLL1P63167 89 aaKnown RBP20.31■□□□□ 0.84
SPAST-203ENST00000615843 DEUP1Q05D60 604 aa20.31■□□□□ 0.84
SPAST-203ENST00000615843 ASPRV1Q53RT3 343 aa20.31■□□□□ 0.84
SPAST-203ENST00000615843 RSBN1LQ6PCB5 846 aaPredicted RBP20.31■□□□□ 0.84
SPAST-203ENST00000615843 SHC4Q6S5L8 630 aa20.31■□□□□ 0.84
SPAST-203ENST00000615843 CCDC138Q96M89 665 aa20.31■□□□□ 0.84
SPAST-203ENST00000615843 LRRC1Q9BTT6 524 aa20.31■□□□□ 0.84
SPAST-203ENST00000615843 MRPL11Q9Y3B7 192 aaKnown RBP20.31■□□□□ 0.84
SPAST-203ENST00000615843 CFLARO15519 480 aa20.31■□□□□ 0.84
SPAST-203ENST00000615843 RANBP1P43487 201 aa20.31■□□□□ 0.84
SPAST-203ENST00000615843 KRT26Q7Z3Y9 468 aa20.31■□□□□ 0.84
SPAST-203ENST00000615843 SAYSD1Q9NPB0 183 aa20.31■□□□□ 0.84
SPAST-203ENST00000615843 BTG4Q9NY30 223 aa20.31■□□□□ 0.84
SPAST-203ENST00000615843 FBXL5Q9UKA1 691 aa20.31■□□□□ 0.84
SPAST-203ENST00000615843 HAUS5O94927 633 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 BTDP43251 543 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 NR1H3Q13133 447 aa20.3■□□□□ 0.84
SPAST-203ENST00000615843 CCDC117Q8IWD4 279 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms