RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 POTEB3A0JP26 581 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 POTECB2RU33 542 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 B4DLN1 442 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 OPLAHO14841 1288 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 SRGAP2O75044 1071 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 POTEBQ6S5H4 581 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 UNC13DQ70J99 1090 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 GLIS2Q9BZE0 524 aaPredicted RBP18.2■□□□□ 0.5
CNOT3-208ENST00000613073 SEMA6BQ9H3T3 888 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 POLD4Q9HCU8 107 aa18.2■□□□□ 0.5
CNOT3-208ENST00000613073 EEF1GP26641 437 aaKnown RBP18.19■□□□□ 0.5
CNOT3-208ENST00000613073 CACNB1Q02641 598 aaPredicted RBP18.19■□□□□ 0.5
CNOT3-208ENST00000613073 CNGA4Q8IV77 575 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 CYP2W1Q8TAV3 490 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 TBC1D5Q92609 795 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 TUBGCP2Q9BSJ2 902 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 CRACR2AQ9BSW2 395 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 KCNMB3Q9NPA1 279 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 MYO6Q9UM54 1294 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 ITIH6Q6UXX5 1313 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 BICDL2A1A5D9 508 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 FAM86B1E9PN63 330 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 FAM86B2P0C5J1 330 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 ERCC3P19447 782 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 AP3B2Q13367 1082 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 MSL3Q8N5Y2 521 aaKnown RBP18.19■□□□□ 0.5
CNOT3-208ENST00000613073 MB21D1Q8N884 522 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 FAM76AQ8TAV0 307 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 SLF1Q9BQI6 1058 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 TFR2Q9UP52 801 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 TMX2Q9Y320 296 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 CAPN7Q9Y6W3 813 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 MYO1FO00160 1098 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 INPP5BP32019 993 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 IRAK1P51617 712 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 CNOT6LQ96LI5 555 aaKnown RBP18.19■□□□□ 0.5
CNOT3-208ENST00000613073 TBC1D7Q9P0N9 293 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 PIM2Q9P1W9 311 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 GUCA1BQ9UMX6 200 aa18.19■□□□□ 0.5
CNOT3-208ENST00000613073 PSME4Q14997 1843 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 GOLGA6CA6NDK9 693 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 LGALS16A8MUM7 142 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 H0YHG0 523 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 WNT10BO00744 389 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 CFBP00751 764 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 GOLGA6DP0CG33 693 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 KRT9P35527 623 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 SEMA3FQ13275 785 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 WHAMMP3Q1A5X7 153 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 BTNL9Q6UXG8 535 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 NAP1L4Q99733 375 aaKnown RBP18.18■□□□□ 0.5
CNOT3-208ENST00000613073 GOPCQ9HD26 462 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 ABHD10Q9NUJ1 306 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 GOLGA6AQ9NYA3 693 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 COL2A1P02458 1487 aaPredicted RBP18.18■□□□□ 0.5
CNOT3-208ENST00000613073 NPHP3-ACAD11A0A0J9YXS1 232 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 MYBL2P10244 700 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 MTIF2P46199 727 aaKnown RBP18.18■□□□□ 0.5
CNOT3-208ENST00000613073 DONSONQ9NYP3 566 aa18.18■□□□□ 0.5
CNOT3-208ENST00000613073 CYP3A7-CYP3A51PA0A087WV96 503 aa18.17■□□□□ 0.5
CNOT3-208ENST00000613073 PVALEFA0A1B0GWK0 134 aa18.17■□□□□ 0.5
CNOT3-208ENST00000613073 CYP3A7P24462 503 aa18.17■□□□□ 0.5
CNOT3-208ENST00000613073 SLC30A10Q6XR72 485 aa18.17■□□□□ 0.5
CNOT3-208ENST00000613073 CRYGNQ8WXF5 182 aa18.17■□□□□ 0.5
CNOT3-208ENST00000613073 POTEFA5A3E0 1075 aa18.17■□□□□ 0.5
CNOT3-208ENST00000613073 MED24O75448 989 aa18.17■□□□□ 0.5
CNOT3-208ENST00000613073 POTEIP0CG38 1075 aa18.17■□□□□ 0.5
CNOT3-208ENST00000613073 KLK7P49862 253 aa18.17■□□□□ 0.5
CNOT3-208ENST00000613073 MRPS25P82663 173 aaKnown RBP18.17■□□□□ 0.5
CNOT3-208ENST00000613073 FKBP15Q5T1M5 1219 aa18.17■□□□□ 0.5
CNOT3-208ENST00000613073 POTEGQ6S5H5 508 aa18.17■□□□□ 0.5
CNOT3-208ENST00000613073 POTEEQ6S8J3 1075 aa18.17■□□□□ 0.5
CNOT3-208ENST00000613073 FAM107BQ9H098 131 aa18.17■□□□□ 0.5
CNOT3-208ENST00000613073 FBXO28Q9NVF7 368 aa18.17■□□□□ 0.5
CNOT3-208ENST00000613073 TTC26A0AVF1 554 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 MEIS1O00470 390 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 EGFRP00533 1210 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 ZNF76P36508 570 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 AARSP49588 968 aaKnown RBP eCLIP18.16■□□□□ 0.5
CNOT3-208ENST00000613073 ERVK-24P63145 666 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 GNGT1P63211 74 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 UBXN2AP68543 259 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 AGBL3Q8NEM8 1001 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 ETNPPLQ8TBG4 499 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 ZNF507Q8TCN5 953 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 DNAJC19Q96DA6 116 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 MMS19Q96T76 1030 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 CENPPQ6IPU0 288 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 SLFN12Q8IYM2 578 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 SLC16A10Q8TF71 515 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 NOC3LQ8WTT2 800 aaKnown RBP18.16■□□□□ 0.5
CNOT3-208ENST00000613073 COG1Q8WTW3 980 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 LENG9Q96B70 501 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 NAA15Q9BXJ9 866 aaKnown RBP18.16■□□□□ 0.5
CNOT3-208ENST00000613073 NT5C3AQ9H0P0 336 aa18.16■□□□□ 0.5
CNOT3-208ENST00000613073 ZC3H4Q9UPT8 1303 aaKnown RBP18.15■□□□□ 0.5
CNOT3-208ENST00000613073 PLA2G4BP0C869 781 aa18.15■□□□□ 0.5
CNOT3-208ENST00000613073 SREBF1P36956 1147 aa18.15■□□□□ 0.5
CNOT3-208ENST00000613073 CAP2P40123 477 aa18.15■□□□□ 0.5
CNOT3-208ENST00000613073 WDR93Q6P2C0 686 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms