RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 GOLGA8FQ08AF8 430 aa13.73□□□□□ -0.21
TP53-219ENST00000610538 GOLGA8DPQ0D2H9 430 aa13.73□□□□□ -0.21
TP53-219ENST00000610538 Q3C1V9 767 aa13.73□□□□□ -0.21
TP53-219ENST00000610538 CACTINQ8WUQ7 758 aaKnown RBP13.73□□□□□ -0.21
TP53-219ENST00000610538 CCDC47Q96A33 483 aaKnown RBP13.73□□□□□ -0.21
TP53-219ENST00000610538 TEKT3Q9BXF9 490 aa13.73□□□□□ -0.21
TP53-219ENST00000610538 BMP2KQ9NSY1 1161 aaPredicted RBP13.73□□□□□ -0.21
TP53-219ENST00000610538 PANK4Q9NVE7 773 aa13.73□□□□□ -0.21
TP53-219ENST00000610538 RWDD2AQ9UIY3 292 aa13.73□□□□□ -0.21
TP53-219ENST00000610538 CXCL11O14625 94 aa13.73□□□□□ -0.21
TP53-219ENST00000610538 OAZ1P54368 228 aa13.73□□□□□ -0.21
TP53-219ENST00000610538 SLC12A3P55017 1021 aa13.73□□□□□ -0.21
TP53-219ENST00000610538 SETQ01105 290 aaPredicted RBP13.73□□□□□ -0.21
TP53-219ENST00000610538 HERC4Q5GLZ8 1057 aaPredicted RBP13.73□□□□□ -0.21
TP53-219ENST00000610538 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.73□□□□□ -0.21
TP53-219ENST00000610538 UNC13DQ70J99 1090 aa13.73□□□□□ -0.21
TP53-219ENST00000610538 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.73□□□□□ -0.21
TP53-219ENST00000610538 JADE2Q9NQC1 790 aa13.73□□□□□ -0.21
TP53-219ENST00000610538 TELO2Q9Y4R8 837 aa13.73□□□□□ -0.21
TP53-219ENST00000610538 UBIAD1Q9Y5Z9 338 aa13.73□□□□□ -0.21
TP53-219ENST00000610538 ZC3H4Q9UPT8 1303 aaKnown RBP13.72□□□□□ -0.21
TP53-219ENST00000610538 RSPH10B2B2RC85 870 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 PSMA7O14818 248 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 DHX15O43143 795 aaKnown RBP13.72□□□□□ -0.21
TP53-219ENST00000610538 TEX33O43247 280 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 RSPH10BP0C881 870 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 PPP2R5CQ13362 524 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 ANKRD40Q6AI12 368 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 NSUN6Q8TEA1 469 aaKnown RBP13.72□□□□□ -0.21
TP53-219ENST00000610538 TRIM47Q96LD4 638 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 SRRTQ9BXP5 876 aaKnown RBP13.72□□□□□ -0.21
TP53-219ENST00000610538 SPATC1LQ9H0A9 340 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 AGO4Q9HCK5 861 aaKnown RBP13.72□□□□□ -0.21
TP53-219ENST00000610538 PYCARDQ9ULZ3 195 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 OTOFQ9HC10 1997 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 CEP350Q5VT06 3117 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 ATP2A1O14983 1001 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 CELF2O95319 508 aaKnown RBP13.72□□□□□ -0.21
TP53-219ENST00000610538 HOXA7P31268 230 aaPredicted RBP13.72□□□□□ -0.21
TP53-219ENST00000610538 PPIL2Q13356 520 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 STIM1Q13586 685 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 LDLRAD1Q5T700 205 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 CNNM4Q6P4Q7 775 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 MAEAQ7L5Y9 396 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 VSIG10LQ86VR7 867 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 PROCA1Q8NCQ7 364 aaPredicted RBP13.72□□□□□ -0.21
TP53-219ENST00000610538 RUSC1Q9BVN2 902 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 VPS16Q9H269 839 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 RABGAP1Q9Y3P9 1069 aa13.72□□□□□ -0.21
TP53-219ENST00000610538 TMEM150BA6NC51 233 aa13.71□□□□□ -0.21
TP53-219ENST00000610538 PES1O00541 588 aaKnown RBP13.71□□□□□ -0.21
TP53-219ENST00000610538 OFD1O75665 1012 aa13.71□□□□□ -0.21
TP53-219ENST00000610538 RGS20O76081 388 aa13.71□□□□□ -0.21
TP53-219ENST00000610538 GHRHRQ02643 423 aa13.71□□□□□ -0.21
TP53-219ENST00000610538 COASYQ13057 564 aa13.71□□□□□ -0.21
TP53-219ENST00000610538 MOGSQ13724 837 aa13.71□□□□□ -0.21
TP53-219ENST00000610538 EEPD1Q7L9B9 569 aa13.71□□□□□ -0.21
TP53-219ENST00000610538 LXNQ9BS40 222 aa13.71□□□□□ -0.21
TP53-219ENST00000610538 MAP3K20Q9NYL2 800 aaKnown RBP13.71□□□□□ -0.21
TP53-219ENST00000610538 AGTPBP1Q9UPW5 1226 aa13.71□□□□□ -0.21
TP53-219ENST00000610538 PARP14Q460N5 1801 aa13.71□□□□□ -0.21
TP53-219ENST00000610538 NKRFO15226 690 aaKnown RBP eCLIP13.71□□□□□ -0.22
TP53-219ENST00000610538 PGK2P07205 417 aa13.71□□□□□ -0.22
TP53-219ENST00000610538 CDC25BP30305 580 aa13.71□□□□□ -0.22
TP53-219ENST00000610538 MIER3Q7Z3K6 550 aa13.71□□□□□ -0.22
TP53-219ENST00000610538 NELFCDQ8IXH7 590 aa13.71□□□□□ -0.22
TP53-219ENST00000610538 REEP2Q9BRK0 252 aa13.71□□□□□ -0.22
TP53-219ENST00000610538 MOV10L1Q9BXT6 1211 aaKnown RBP13.71□□□□□ -0.22
TP53-219ENST00000610538 GPBP1L1Q9HC44 474 aaPredicted RBP13.71□□□□□ -0.22
TP53-219ENST00000610538 RBPJLQ9UBG7 517 aa13.71□□□□□ -0.22
TP53-219ENST00000610538 PNMA2Q9UL42 364 aa13.71□□□□□ -0.22
TP53-219ENST00000610538 KCNH4Q9UQ05 1017 aa13.71□□□□□ -0.22
TP53-219ENST00000610538 ASTN1O14525 1302 aa13.7□□□□□ -0.22
TP53-219ENST00000610538 PTPRFP10586 1907 aa13.7□□□□□ -0.22
TP53-219ENST00000610538 PVALEFA0A1B0GWK0 134 aa13.7□□□□□ -0.22
TP53-219ENST00000610538 CDKAL1Q5VV42 579 aa13.7□□□□□ -0.22
TP53-219ENST00000610538 GPAT2Q6NUI2 795 aa13.7□□□□□ -0.22
TP53-219ENST00000610538 IRF2BP1Q8IU81 584 aa13.7□□□□□ -0.22
TP53-219ENST00000610538 TEX2Q8IWB9 1127 aa13.7□□□□□ -0.22
TP53-219ENST00000610538 CSGALNACT2Q8N6G5 542 aa13.7□□□□□ -0.22
TP53-219ENST00000610538 SYT2Q8N9I0 419 aaPredicted RBP13.7□□□□□ -0.22
TP53-219ENST00000610538 RIT2Q99578 217 aa13.7□□□□□ -0.22
TP53-219ENST00000610538 POLR3CQ9BUI4 534 aaPredicted RBP13.7□□□□□ -0.22
TP53-219ENST00000610538 SEMA6BQ9H3T3 888 aa13.7□□□□□ -0.22
TP53-219ENST00000610538 TAB2Q9NYJ8 693 aa13.7□□□□□ -0.22
TP53-219ENST00000610538 BCRP11274 1271 aa13.7□□□□□ -0.22
TP53-219ENST00000610538 CCND2P30279 289 aa13.7□□□□□ -0.22
TP53-219ENST00000610538 GIT2Q14161 759 aa13.7□□□□□ -0.22
TP53-219ENST00000610538 UTP14CQ5TAP6 766 aaKnown RBP13.7□□□□□ -0.22
TP53-219ENST00000610538 TTI2Q6NXR4 508 aa13.7□□□□□ -0.22
TP53-219ENST00000610538 SEMA3FQ13275 785 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 SNAPC2Q13487 334 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 KRT31Q15323 416 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 CT47A1Q5JQC4 288 aaPredicted RBP13.69□□□□□ -0.22
TP53-219ENST00000610538 SEPT14Q6ZU15 432 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 APTXQ7Z2E3 356 aaKnown RBP13.69□□□□□ -0.22
TP53-219ENST00000610538 LRRC8AQ8IWT6 810 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 P2RX5Q93086 422 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 DUSP9Q99956 384 aaKnown RBP13.69□□□□□ -0.22
TP53-219ENST00000610538 LRRC27Q9C0I9 530 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms