RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 FANCGO15287 622 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 BCRP11274 1271 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 LRRC41Q15345 812 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 BMT2Q1RMZ1 405 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 NEK9Q8TD19 979 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 SCFD1Q8WVM8 642 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 TEPSINQ96N21 525 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 RIT2Q99578 217 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 EIF3CQ99613 913 aaKnown RBP13.22□□□□□ -0.29
USP6NL-206ENST00000609853 CHP1Q99653 195 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 SLF1Q9BQI6 1058 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 ZNF341Q9BYN7 854 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 KCTD10Q9H3F6 313 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 TRAF3IP3Q9Y228 551 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 CD2APQ9Y5K6 639 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 PDXKO00764 312 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 CETN3O15182 167 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 TBCAO75347 108 aaKnown RBP13.22□□□□□ -0.29
USP6NL-206ENST00000609853 TADA3O75528 432 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 PRELPP51888 382 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 USP14P54578 494 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 PABPC4Q13310 644 aaKnown RBP eCLIP13.22□□□□□ -0.29
USP6NL-206ENST00000609853 CCDC40Q4G0X9 1142 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 CDAN1Q8IWY9 1227 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 ACRBPQ8NEB7 543 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 CYP2W1Q8TAV3 490 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 EEF2KMTQ96G04 330 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 WDR18Q9BV38 432 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 OLFML3Q9NRN5 406 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 AGPAT5Q9NUQ2 364 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 CCPG1Q9ULG6 757 aa13.22□□□□□ -0.29
USP6NL-206ENST00000609853 NFKBIEO00221 500 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 CALUO43852 315 aaPredicted RBP13.21□□□□□ -0.3
USP6NL-206ENST00000609853 GAS7O60861 476 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 ARHGAP25P42331 645 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 PSMC6P62333 389 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 EPHA7Q15375 998 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 ELF2Q15723 593 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 ZYXQ15942 572 aaKnown RBP13.21□□□□□ -0.3
USP6NL-206ENST00000609853 KNOP1Q1ED39 458 aaKnown RBP13.21□□□□□ -0.3
USP6NL-206ENST00000609853 ZNF569Q5MCW4 686 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 DCAF15Q66K64 600 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 EPM2AIP1Q7L775 607 aaPredicted RBP13.21□□□□□ -0.3
USP6NL-206ENST00000609853 TXLNBQ8N3L3 684 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 CEP112Q8N8E3 955 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 SYN2Q92777 582 aaPredicted RBP13.21□□□□□ -0.3
USP6NL-206ENST00000609853 NACC1Q96RE7 527 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 REEP2Q9BRK0 252 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 TSGA10Q9BZW7 698 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 NHEJ1Q9H9Q4 299 aaPredicted RBP13.21□□□□□ -0.3
USP6NL-206ENST00000609853 SEL1LQ9UBV2 794 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 CDC23Q9UJX2 597 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 RPTORQ8N122 1335 aa13.21□□□□□ -0.3
USP6NL-206ENST00000609853 KRT86O43790 486 aa13.2□□□□□ -0.3
USP6NL-206ENST00000609853 RPL13P26373 211 aaKnown RBP13.2□□□□□ -0.3
USP6NL-206ENST00000609853 ADAM9Q13443 819 aa13.2□□□□□ -0.3
USP6NL-206ENST00000609853 FRMD5Q7Z6J6 570 aa13.2□□□□□ -0.3
USP6NL-206ENST00000609853 TRIM59Q8IWR1 403 aa13.2□□□□□ -0.3
USP6NL-206ENST00000609853 GLIS3Q8NEA6 775 aa13.2□□□□□ -0.3
USP6NL-206ENST00000609853 NEK11Q8NG66 645 aa13.2□□□□□ -0.3
USP6NL-206ENST00000609853 TBC1D5Q92609 795 aa13.2□□□□□ -0.3
USP6NL-206ENST00000609853 NAPGQ99747 312 aaPredicted RBP13.2□□□□□ -0.3
USP6NL-206ENST00000609853 MXRA8Q9BRK3 442 aa13.2□□□□□ -0.3
USP6NL-206ENST00000609853 ZNF577Q9BSK1 485 aa13.2□□□□□ -0.3
USP6NL-206ENST00000609853 CARD6Q9BX69 1037 aa13.2□□□□□ -0.3
USP6NL-206ENST00000609853 TEKT3Q9BXF9 490 aa13.2□□□□□ -0.3
USP6NL-206ENST00000609853 BHMT2Q9H2M3 363 aa13.2□□□□□ -0.3
USP6NL-206ENST00000609853 FBXO28Q9NVF7 368 aa13.2□□□□□ -0.3
USP6NL-206ENST00000609853 ARGLU1Q9NWB6 273 aaPredicted RBP13.2□□□□□ -0.3
USP6NL-206ENST00000609853 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.2□□□□□ -0.3
USP6NL-206ENST00000609853 RBBP6Q7Z6E9 1792 aaKnown RBP13.2□□□□□ -0.3
USP6NL-206ENST00000609853 NPHP3-ACAD11A0A0J9YXS1 232 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 EML1O00423 815 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 ZNF536O15090 1300 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 EIF3DO15371 548 aaKnown RBP eCLIP13.19□□□□□ -0.3
USP6NL-206ENST00000609853 SLITRK3O94933 977 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 UBE4BO95155 1302 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 ZBTB7AO95365 584 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 INPP5BP32019 993 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 NAA30Q147X3 362 aaPredicted RBP13.19□□□□□ -0.3
USP6NL-206ENST00000609853 SPA17Q15506 151 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 ERCC6LQ2NKX8 1250 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 RINT1Q6NUQ1 792 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 B3GNT9Q6UX72 402 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 STXBP4Q6ZWJ1 553 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 CCDC42Q96M95 316 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 GLIS2Q9BZE0 524 aaPredicted RBP13.19□□□□□ -0.3
USP6NL-206ENST00000609853 TANGO6Q9C0B7 1094 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 ZHX3Q9H4I2 956 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 MMRN2Q9H8L6 949 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 SLC38A10Q9HBR0 1119 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 METTL14Q9HCE5 456 aaKnown RBP13.19□□□□□ -0.3
USP6NL-206ENST00000609853 TBC1D7Q9P0N9 293 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 REXO2Q9Y3B8 237 aaKnown RBP13.19□□□□□ -0.3
USP6NL-206ENST00000609853 DOCK1Q14185 1865 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 FZD9O00144 591 aa13.19□□□□□ -0.3
USP6NL-206ENST00000609853 IPO5O00410 1097 aaKnown RBP13.19□□□□□ -0.3
USP6NL-206ENST00000609853 SLC16A3O15427 465 aaKnown RBP13.19□□□□□ -0.3
USP6NL-206ENST00000609853 H2AFXP16104 143 aaPredicted RBP13.19□□□□□ -0.3
USP6NL-206ENST00000609853 TAL1P17542 331 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms