RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 TCF7P36402 384 aaPredicted RBP16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 ACLYP53396 1101 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 PPP2R5CQ13362 524 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 FAM160B1Q5W0V3 765 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 MIER3Q7Z3K6 550 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 HAS1Q92839 578 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 VTI1AQ96AJ9 217 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 GLT1D1Q96MS3 346 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 MTMR9Q96QG7 549 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 MTG1Q9BT17 334 aaPredicted RBP16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 TMEM60Q9H2L4 133 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 TTC12Q9H892 705 aaPredicted RBP16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 CFAP45Q9UL16 551 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 PHF24Q9UPV7 400 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 PCDHA10Q9Y5I2 948 aa16.44■□□□□ 0.22
SCAMP4-209ENST00000585335 BACH1O14867 736 aa16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 CTAGE5O15320 804 aa16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 HOXD8P13378 290 aaPredicted RBP16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 EN2P19622 333 aaPredicted RBP16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 SOX10P56693 466 aa16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 ATP2C1P98194 919 aaPredicted RBP16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 SF3A1Q15459 793 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 ARL6IP4Q66PJ3 421 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 NCAPH2Q6IBW4 605 aa16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 FAM173BQ6P4H8 233 aa16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 DTHD1Q6ZMT9 781 aa16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 GLG1Q92896 1179 aa16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 GJA10Q969M2 543 aa16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 UNC45AQ9H3U1 944 aa16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 SMARCAD1Q9H4L7 1026 aa16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 BCAS3Q9H6U6 928 aa16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 DISC1Q9NRI5 854 aa16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 CHMP5Q9NZZ3 219 aa16.43■□□□□ 0.22
SCAMP4-209ENST00000585335 DOCK5Q9H7D0 1870 aa16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 A0A1W2PQ45 241 aaPredicted RBP16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 A0A1W2PQY0 241 aa16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 CCNE2O96020 404 aa16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 LGALS2P05162 132 aa16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 SUPT20HL2P0C7V6 817 aa16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 PURAQ00577 322 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 STK38Q15208 465 aa16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 FOXD4L6Q3SYB3 417 aaPredicted RBP16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 UTP14CQ5TAP6 766 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 CCSAPQ6IQ19 270 aaPredicted RBP16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 CXCL17Q6UXB2 119 aa16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 FOXD4L3Q6VB84 417 aaPredicted RBP16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 NECAB2Q7Z6G3 386 aa16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 ERMNQ8TAM6 284 aa16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 TNPO1Q92973 898 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 C11orf49Q9H6J7 331 aa16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 VAV3Q9UKW4 847 aa16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 ZDHHC9Q9Y397 364 aa16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 CLIC4Q9Y696 253 aa16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 STK24Q9Y6E0 443 aa16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 EMSYQ7Z589 1322 aa16.42■□□□□ 0.22
SCAMP4-209ENST00000585335 CENPFP49454 3210 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 GSTTP1A0A1W2PQM5 241 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 DKC1O60832 514 aaKnown RBP eCLIP16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 ATG7O95352 703 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 ZNF286BP0CG31 522 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 NCLP19338 710 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 TECP42680 631 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 SLC26A2P50443 739 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 FXR2P51116 673 aaKnown RBP eCLIP16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 KRT85P78386 507 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 IRX5P78411 483 aaPredicted RBP16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 CEBPZQ03701 1054 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 ABHD15Q6UXT9 468 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 C4orf32Q8N8J7 132 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 NEK9Q8TD19 979 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 ATP6V0A1Q93050 837 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 FERMT2Q96AC1 680 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 USP28Q96RU2 1077 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 SEZ6LQ9BYH1 1024 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 SENP6Q9GZR1 1112 aaPredicted RBP16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 STARD7Q9NQZ5 370 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 ERAP1Q9NZ08 941 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 MYH15Q9Y2K3 1946 aa16.41■□□□□ 0.22
SCAMP4-209ENST00000585335 KIAA0100Q14667 2235 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 A0A0U1RQG5 324 aaPredicted RBP16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 LGR5O75473 907 aa16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 YEATS4O95619 227 aa16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 F2P00734 622 aa16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 NASPP49321 788 aaPredicted RBP16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 STAT5BP51692 787 aa16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 CHMP4BP1P59074 171 aa16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 PDIA5Q14554 519 aa16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 MFSD10Q14728 455 aa16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 PDXDC2PQ6P474 469 aa16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 PLPPR4Q7Z2D5 763 aa16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 CKAP2LQ8IYA6 745 aa16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 PAWRQ96IZ0 340 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 ZNF302Q9NR11 478 aa16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 MORC2Q9Y6X9 1032 aaPredicted RBP16.4■□□□□ 0.22
SCAMP4-209ENST00000585335 H3BRB1 525 aa16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 PSEN2P49810 448 aa16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 DNM1Q05193 864 aaKnown RBP16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 SLC39A14Q15043 492 aa16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 EPHA7Q15375 998 aa16.39■□□□□ 0.21
SCAMP4-209ENST00000585335 HAUS3Q68CZ6 603 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms