RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 PPP1R2P41236 205 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 MAP9Q49MG5 647 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 TMEM139Q8IV31 216 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 SMAP1Q8IYB5 467 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-217ENST00000584582 CTNNBL1Q8WYA6 563 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-217ENST00000584582 GLT8D2Q9H1C3 349 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 CHORDC1Q9UHD1 332 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-217ENST00000584582 CALUO43852 315 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-217ENST00000584582 DLATP10515 647 aaKnown RBP12.41□□□□□ -0.42
TOP3A-217ENST00000584582 DPEP1P16444 411 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 SLC9A1P19634 815 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 VSNL1P62760 191 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 KCNA1Q09470 495 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 XKR9Q5GH70 373 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 ZNF772Q68DY9 489 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-217ENST00000584582 C8orf74Q6P047 294 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 HDXQ7Z353 690 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 GUF1Q8N442 669 aaKnown RBP12.41□□□□□ -0.42
TOP3A-217ENST00000584582 SUPT20HQ8NEM7 779 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 EIF2AK1Q9BQI3 630 aaKnown RBP12.41□□□□□ -0.42
TOP3A-217ENST00000584582 CCDC113Q9H0I3 377 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 DOT1LQ8TEK3 1739 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 RASA3Q14644 834 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 SPATA20Q8TB22 786 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 MS4A14Q96JA4 679 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 ZNF668Q96K58 619 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-217ENST00000584582 MAGEF1Q9HAY2 307 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 PODXL2Q9NZ53 605 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 CAPN11Q9UMQ6 739 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 A0A1W2PRG0 241 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 TMEM150BA6NC51 233 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 FAM86B1E9PN63 330 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 FAM86B2P0C5J1 330 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 CC2D1AQ6P1N0 951 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-217ENST00000584582 STXBP4Q6ZWJ1 553 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 L2HGDHQ9H9P8 463 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 GCNT4Q9P109 453 aa12.41□□□□□ -0.42
TOP3A-217ENST00000584582 MRPL11Q9Y3B7 192 aaKnown RBP12.41□□□□□ -0.42
TOP3A-217ENST00000584582 COL14A1Q05707 1796 aaKnown RBP12.4□□□□□ -0.42
TOP3A-217ENST00000584582 MYL1P05976 194 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 CETN1Q12798 172 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 DACT2Q5SW24 774 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 DAGLBQ8NCG7 672 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 HAS1Q92839 578 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 ZDHHC15Q96MV8 337 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 PAGR1Q9BTK6 254 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 PICK1Q9NRD5 415 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 GAKO14976 1311 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 SHTN1A0MZ66 631 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 POTEB2H3BUK9 544 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 ZEB2O60315 1214 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 FOSP01100 380 aaPredicted RBP12.4□□□□□ -0.42
TOP3A-217ENST00000584582 CASP4P49662 377 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 MKRN4PQ13434 485 aaPredicted RBP12.4□□□□□ -0.42
TOP3A-217ENST00000584582 ARHGEF16Q5VV41 709 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 LDHDQ86WU2 507 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 FAM186BQ8IYM0 893 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 DCAF4Q8WV16 495 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 RIN2Q8WYP3 895 aaPredicted RBP12.4□□□□□ -0.42
TOP3A-217ENST00000584582 AKT1S1Q96B36 256 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 NAP1L4Q99733 375 aaKnown RBP12.4□□□□□ -0.42
TOP3A-217ENST00000584582 ZNF70Q9UC06 446 aaPredicted RBP12.4□□□□□ -0.42
TOP3A-217ENST00000584582 AKAP11Q9UKA4 1901 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 MYH13Q9UKX3 1938 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 TOGARAM1Q9Y4F4 1720 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 USP54Q70EL1 1684 aa12.4□□□□□ -0.42
TOP3A-217ENST00000584582 PVALEFA0A1B0GWK0 134 aa12.4□□□□□ -0.43
TOP3A-217ENST00000584582 CCDC66A2RUB6 948 aa12.4□□□□□ -0.43
TOP3A-217ENST00000584582 ANKRD65E5RJM6 399 aa12.4□□□□□ -0.43
TOP3A-217ENST00000584582 KRT5P13647 590 aa12.4□□□□□ -0.43
TOP3A-217ENST00000584582 BAG6P46379 1132 aa12.4□□□□□ -0.43
TOP3A-217ENST00000584582 LRRC63Q05C16 580 aa12.4□□□□□ -0.43
TOP3A-217ENST00000584582 DPH6Q7L8W6 267 aa12.4□□□□□ -0.43
TOP3A-217ENST00000584582 PPM1KQ8N3J5 372 aa12.4□□□□□ -0.43
TOP3A-217ENST00000584582 TXLNBQ8N3L3 684 aa12.4□□□□□ -0.43
TOP3A-217ENST00000584582 FAM163AQ96GL9 167 aaPredicted RBP12.4□□□□□ -0.43
TOP3A-217ENST00000584582 SH2D4AQ9H788 454 aa12.4□□□□□ -0.43
TOP3A-217ENST00000584582 DNAJC18Q9H819 358 aa12.4□□□□□ -0.43
TOP3A-217ENST00000584582 CYP11B2P19099 503 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 POLD1P28340 1107 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 CASP5P51878 434 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 WHAMMP3Q1A5X7 153 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 TRIM58Q8NG06 486 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 ANKS1AQ92625 1134 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 PNKPQ96T60 521 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 ZNF408Q9H9D4 720 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 RSPH14Q9UHP6 348 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 IPO5O00410 1097 aaKnown RBP12.39□□□□□ -0.43
TOP3A-217ENST00000584582 MSH4O15457 936 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 KCTD16Q68DU8 428 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 DAAM2Q86T65 1068 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 PURBQ96QR8 312 aaKnown RBP12.39□□□□□ -0.43
TOP3A-217ENST00000584582 RUSC1Q9BVN2 902 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 TEKT3Q9BXF9 490 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 FAN1Q9Y2M0 1017 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 RCCD1A6NED2 376 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 hCG_1984214I3L0E3 225 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 ABCC6O95255 1503 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 ITGB4P16144 1822 aa12.39□□□□□ -0.43
TOP3A-217ENST00000584582 TNFAIP3P21580 790 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms