RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 TRIM14Q14142 442 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 BMS1Q14692 1282 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 TERF2Q15554 542 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 ZCWPW2Q504Y3 356 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 TDRD12Q587J7 1177 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 GPR161Q8N6U8 529 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 BANK1Q8NDB2 785 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 MS4A14Q96JA4 679 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 CCDC42Q96M95 316 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 IDI2Q9BXS1 227 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 SUGT1Q9Y2Z0 365 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 SORBS3O60504 671 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 LRRN2O75325 713 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 MYL1P05976 194 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 SLC9A1P19634 815 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 NMT1P30419 496 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ZNF76P36508 570 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 NBPF9Q3BBW0 867 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 TMEM179Q6ZVK1 233 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 TPH2Q8IWU9 490 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 NEK11Q8NG66 645 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 RABGGTAQ92696 567 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 AMNQ9BXJ7 453 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 EHD4Q9H223 541 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 DHX36Q9H2U1 1008 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 DEF6Q9H4E7 631 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 PDE11AQ9HCR9 933 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 NYAP2Q9P242 653 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 SPDYE3A6NKU9 549 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 TISP43B9A030 160 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 SLC7A5Q01650 507 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 GIT2Q14161 759 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 MAN2A1Q16706 1144 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 DCAF17Q5H9S7 520 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 PRAMEF18Q5VWM3 479 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 TRAPPC11Q7Z392 1133 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 FAM133AQ8N9E0 248 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 RIN2Q8WYP3 895 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 AGBL1Q96MI9 1066 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ERGIC2Q96RQ1 377 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 IFIH1Q9BYX4 1025 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 RAB34Q9BZG1 259 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 KCTD10Q9H3F6 313 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 MAGEF1Q9HAY2 307 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 EMILIN3Q9NT22 766 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 PCDHA13Q9Y5I0 950 aa11.83□□□□□ -0.52
CDK5RAP3-225ENST00000582482 PVALEFA0A1B0GWK0 134 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CTAGE15A4D2H0 777 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 PLSCR1O15162 318 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 AKR1B10O60218 316 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ABCB11O95342 1321 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CTAGE8P0CG41 777 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ARP10275 920 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 RAPGEF1Q13905 1077 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CACNA2D4Q7Z3S7 1137 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CTAGE6Q86UF2 777 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CTAGE4Q8IX94 777 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 IL31RAQ8NI17 732 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 NOC3LQ8WTT2 800 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 DCAF4Q8WV16 495 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CRYGNQ8WXF5 182 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 MKL1Q969V6 931 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CCDC17Q96LX7 622 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ZNHIT6Q9NWK9 470 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ZBTB21Q9ULJ3 1066 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 COL4A3BPQ9Y5P4 624 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CNTNAP1P78357 1384 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 LRRIQ3A6PVS8 624 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 TUBB4AP04350 444 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 NR2F2P24468 414 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ADAM9Q13443 819 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 SMC1AQ14683 1233 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 LARGE2Q8N3Y3 721 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 DYDC2Q96IM9 177 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 FAM84AQ96KN4 292 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ARFGAP3Q9NP61 516 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ARGLU1Q9NWB6 273 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 PPP1R1BQ9UD71 204 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 VAV3Q9UKW4 847 aa11.82□□□□□ -0.52
CDK5RAP3-225ENST00000582482 SPDYE2BA6NHP3 402 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 hCG_1984214I3L0E3 225 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 FTCDO95954 541 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 SPDYE6P0CI01 402 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 NAP1L1P55209 391 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 BEND6Q5SZJ8 279 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 TCERG1LQ5VWI1 586 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 HGSNATQ68CP4 663 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 PPP1R18Q6NYC8 613 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 FAM114A1Q8IWE2 563 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CPXCR1Q8N123 301 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ZNF713Q8N859 430 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CAGE1Q8TC20 777 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 EIF2AK1Q9BQI3 630 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 ZNF70Q9UC06 446 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 SERPINA10Q9UK55 444 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 AKAP3O75969 853 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 DPEP1P16444 411 aa11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 CYLC1P35663 651 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-225ENST00000582482 PDXDC1Q6P996 788 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms