RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 BCRP11274 1271 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 PPP1R2P41236 205 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 SARSP49591 514 aaKnown RBP10.88□□□□□ -0.67
UBFD1-202ENST00000563366 MMP16P51512 607 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 IRX3P78415 501 aaPredicted RBP10.88□□□□□ -0.67
UBFD1-202ENST00000563366 KARSQ15046 597 aaKnown RBP10.88□□□□□ -0.67
UBFD1-202ENST00000563366 CEP55Q53EZ4 464 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 PRR16Q569H4 304 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 LDLRAD1Q5T700 205 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 SNRNP48Q6IEG0 339 aaKnown RBP10.88□□□□□ -0.67
UBFD1-202ENST00000563366 PDXDC2PQ6P474 469 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 LBX2Q6XYB7 198 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 CHST13Q8NET6 341 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 SNX29Q8TEQ0 813 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 GTF3C2Q8WUA4 911 aaPredicted RBP10.88□□□□□ -0.67
UBFD1-202ENST00000563366 CLEC4DQ8WXI8 215 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 ZNF516Q92618 1163 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 PAGE5Q96GU1 130 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 NUDT12Q9BQG2 462 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 PANK2Q9BZ23 570 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 WDR11Q9BZH6 1224 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 ACAD9Q9H845 621 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 CBX8Q9HC52 389 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 RNF146Q9NTX7 359 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 PCDH10Q9P2E7 1040 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 ZNF214Q9UL59 606 aaPredicted RBP10.88□□□□□ -0.67
UBFD1-202ENST00000563366 AGTPBP1Q9UPW5 1226 aa10.88□□□□□ -0.67
UBFD1-202ENST00000563366 RPTORQ8N122 1335 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 A0A087X0B3 334 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 NFIBO00712 420 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 IKBKBO14920 756 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 PLCG1P19174 1290 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 DPYDQ12882 1025 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 SNAPC2Q13487 334 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 DGKZQ13574 1117 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 DPCR1Q3MIW9 517 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 HYIQ5T013 277 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 PCNX4Q63HM2 1172 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 GADL1Q6ZQY3 521 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 RNF207Q6ZRF8 634 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 REPS2Q8NFH8 660 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 ETNPPLQ8TBG4 499 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 HAS1Q92839 578 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 RNF166Q96A37 237 aaPredicted RBP10.87□□□□□ -0.67
UBFD1-202ENST00000563366 OPTNQ96CV9 577 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 TRIM44Q96DX7 344 aaPredicted RBP10.87□□□□□ -0.67
UBFD1-202ENST00000563366 PPP1R9BQ96SB3 815 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 PLSCR2Q9NRY7 297 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 KBTBD4Q9NVX7 518 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 MAP10Q9P2G4 905 aa10.87□□□□□ -0.67
UBFD1-202ENST00000563366 PFASO15067 1338 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 IGLV3-22A0A075B6J6 115 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 POM121CA8CG34 1229 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 B4DLN1 442 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 FAM86B1E9PN63 330 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 BIN1O00499 593 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 EDIL3O43854 480 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 STAM2O75886 525 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 FAM86B2P0C5J1 330 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 MUTP22033 750 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 STAT3P40763 770 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 AFMP43652 599 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 RPS6P62753 249 aaKnown RBP10.86□□□□□ -0.67
UBFD1-202ENST00000563366 MORC3Q14149 939 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 KCNB1Q14721 858 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 C11orf57Q6ZUT1 292 aaPredicted RBP10.86□□□□□ -0.67
UBFD1-202ENST00000563366 SV2BQ7L1I2 683 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 PLA2G4DQ86XP0 818 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 LARP4BQ92615 738 aaKnown RBP10.86□□□□□ -0.67
UBFD1-202ENST00000563366 LENG9Q96B70 501 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 SLC10A4Q96EP9 437 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 CCDC97Q96F63 343 aaPredicted RBP10.86□□□□□ -0.67
UBFD1-202ENST00000563366 PDLIM2Q96JY6 352 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 RIT2Q99578 217 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 SLC6A16Q9GZN6 736 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 HOMER2Q9NSB8 354 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 HCSTQ9UBK5 93 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 TCEAL9Q9UHQ7 104 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 MAN1B1Q9UKM7 699 aa10.86□□□□□ -0.67
UBFD1-202ENST00000563366 PP2D1A8MPX8 630 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 MEIS1O00470 390 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 MSH4O15457 936 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 MAFGO15525 162 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 SLC25A27O95847 323 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 RPN1P04843 607 aaKnown RBP10.85□□□□□ -0.67
UBFD1-202ENST00000563366 ERCC5P28715 1186 aaPredicted RBP10.85□□□□□ -0.67
UBFD1-202ENST00000563366 CCND2P30279 289 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 CDC25AP30304 524 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 CCT6AP40227 531 aaKnown RBP10.85□□□□□ -0.67
UBFD1-202ENST00000563366 MYL5Q02045 173 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 VAC14Q08AM6 782 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 STIM1Q13586 685 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 TMEM132BQ14DG7 1078 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 IQCB1Q15051 598 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 NAALADL2Q58DX5 795 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 MUM1L1Q5H9M0 696 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 LRCH2Q5VUJ6 765 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 SARM1Q6SZW1 724 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 NSMFQ6X4W1 530 aa10.85□□□□□ -0.67
UBFD1-202ENST00000563366 LUZP1Q86V48 1076 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms