RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 INVSQ9Y283 1065 aa5.72□□□□□ -1.49
SPG11-218ENST00000559754 TRAF6Q9Y4K3 522 aa5.72□□□□□ -1.49
SPG11-218ENST00000559754 ASXL2Q76L83 1435 aa5.72□□□□□ -1.49
SPG11-218ENST00000559754 KDM2BQ8NHM5 1336 aa5.72□□□□□ -1.49
SPG11-218ENST00000559754 WNT9AO14904 365 aa5.71□□□□□ -1.5
SPG11-218ENST00000559754 ENO2P09104 434 aaPredicted RBP5.71□□□□□ -1.5
SPG11-218ENST00000559754 SERINC3Q13530 473 aa5.71□□□□□ -1.5
SPG11-218ENST00000559754 GPR19Q15760 415 aa5.71□□□□□ -1.5
SPG11-218ENST00000559754 FAM209AQ5JX71 171 aa5.71□□□□□ -1.5
SPG11-218ENST00000559754 EP400NLQ6ZTU2 488 aa5.71□□□□□ -1.5
SPG11-218ENST00000559754 PROSER1Q86XN7 944 aa5.71□□□□□ -1.5
SPG11-218ENST00000559754 KLHL36Q8N4N3 616 aa5.71□□□□□ -1.5
SPG11-218ENST00000559754 ZCCHC14Q8WYQ9 949 aaKnown RBP5.71□□□□□ -1.5
SPG11-218ENST00000559754 FBXW5Q969U6 566 aa5.71□□□□□ -1.5
SPG11-218ENST00000559754 MKL1Q969V6 931 aa5.71□□□□□ -1.5
SPG11-218ENST00000559754 BARX1Q9HBU1 254 aaPredicted RBP5.71□□□□□ -1.5
SPG11-218ENST00000559754 ZNF536O15090 1300 aa5.71□□□□□ -1.5
SPG11-218ENST00000559754 DIAPH1O60610 1272 aaKnown RBP5.7□□□□□ -1.5
SPG11-218ENST00000559754 FBXO21O94952 628 aa5.7□□□□□ -1.5
SPG11-218ENST00000559754 LTFP02788 710 aa5.7□□□□□ -1.5
SPG11-218ENST00000559754 CKMP06732 381 aa5.7□□□□□ -1.5
SPG11-218ENST00000559754 ST5P78524 1137 aa5.7□□□□□ -1.5
SPG11-218ENST00000559754 GUCY1A3Q02108 690 aa5.7□□□□□ -1.5
SPG11-218ENST00000559754 RASA3Q14644 834 aa5.7□□□□□ -1.5
SPG11-218ENST00000559754 SMAD2Q15796 467 aaKnown RBP5.7□□□□□ -1.5
SPG11-218ENST00000559754 TBC1D10BQ4KMP7 808 aaPredicted RBP5.7□□□□□ -1.5
SPG11-218ENST00000559754 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
SPG11-218ENST00000559754 RBM12BQ8IXT5 1001 aaKnown RBP5.7□□□□□ -1.5
SPG11-218ENST00000559754 KRTAP9-3Q9BYQ3 159 aa5.7□□□□□ -1.5
SPG11-218ENST00000559754 ARHGAP20Q9P2F6 1191 aa5.7□□□□□ -1.5
SPG11-218ENST00000559754 WASF3Q9UPY6 502 aa5.7□□□□□ -1.5
SPG11-218ENST00000559754 CCDC163A0A0D9SF12 145 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 ARVCFO00192 962 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 LAMTOR5O43504 91 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 EFCAB14O75071 495 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 C6orf222P0C671 652 aaPredicted RBP5.69□□□□□ -1.5
SPG11-218ENST00000559754 FAM153BP0C7A2 387 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 GJA4P35212 333 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 SKIDA1Q1XH10 827 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 FAM47CQ5HY64 1035 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 FOXB2Q5VYV0 432 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 CD276Q5ZPR3 534 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 GLB1LQ6UWU2 654 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 HHIPL2Q6UWX4 724 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 C16orf59Q7L2K0 433 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 TTC9BQ8N6N2 239 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 EXOC2Q96KP1 924 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 SAMD11Q96NU1 681 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 SRPK1Q96SB4 655 aaKnown RBP5.69□□□□□ -1.5
SPG11-218ENST00000559754 RBM15Q96T37 977 aaKnown RBP eCLIP5.69□□□□□ -1.5
SPG11-218ENST00000559754 CATSPERZQ9NTU4 200 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 SNTG2Q9NY99 539 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 RBPJLQ9UBG7 517 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 MRPS23Q9Y3D9 190 aaKnown RBP5.69□□□□□ -1.5
SPG11-218ENST00000559754 TELO2Q9Y4R8 837 aa5.69□□□□□ -1.5
SPG11-218ENST00000559754 ZNF839A8K0R7 811 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 B4GALT3O60512 393 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 MAGEA10P43363 369 aaPredicted RBP5.68□□□□□ -1.5
SPG11-218ENST00000559754 NFKB2Q00653 900 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 PFKPQ01813 784 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 NFATC3Q12968 1075 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 CRY1Q16526 586 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 BTBD8Q5XKL5 378 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 PKN3Q6P5Z2 889 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 ARHGAP36Q6ZRI8 547 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 ARHGEF18Q6ZSZ5 1173 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 PCDH19Q8TAB3 1148 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 IGDCC4Q8TDY8 1250 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 MBD6Q96DN6 1003 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 CD244Q9BZW8 370 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 SMPD4Q9NXE4 827 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 ZFP69BQ9UJL9 534 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 SRPK3Q9UPE1 567 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 PCDHA8Q9Y5H6 950 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 ATP23Q9Y6H3 246 aa5.68□□□□□ -1.5
SPG11-218ENST00000559754 COL6A1P12109 1028 aa5.67□□□□□ -1.5
SPG11-218ENST00000559754 FIGNQ5HY92 759 aa5.67□□□□□ -1.5
SPG11-218ENST00000559754 DPP8Q6V1X1 898 aaPredicted RBP5.67□□□□□ -1.5
SPG11-218ENST00000559754 ZC3H7AQ8IWR0 971 aaKnown RBP5.67□□□□□ -1.5
SPG11-218ENST00000559754 KBTBD2Q8IY47 623 aa5.67□□□□□ -1.5
SPG11-218ENST00000559754 ZSWIM2Q8NEG5 633 aa5.67□□□□□ -1.5
SPG11-218ENST00000559754 LOXL4Q96JB6 756 aa5.67□□□□□ -1.5
SPG11-218ENST00000559754 GPR20Q99678 358 aa5.67□□□□□ -1.5
SPG11-218ENST00000559754 RIC8BQ9NVN3 520 aa5.67□□□□□ -1.5
SPG11-218ENST00000559754 ADAM29Q9UKF5 820 aa5.67□□□□□ -1.5
SPG11-218ENST00000559754 ZDHHC9Q9Y397 364 aa5.67□□□□□ -1.5
SPG11-218ENST00000559754 TCRBV5S4A2TA0A5A2 114 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 FAM221BA6H8Z2 402 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 H0Y858 1186 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 ACOT7O00154 380 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 CRTAMO95727 393 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 SRGAP2CP0DJJ0 459 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 PYGMP11217 842 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 PDE6AP16499 860 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 PTPN1P18031 435 aaKnown RBP5.66□□□□□ -1.5
SPG11-218ENST00000559754 GLRBP48167 497 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 PPP2CBP62714 309 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 PPP2CAP67775 309 aa5.66□□□□□ -1.5
SPG11-218ENST00000559754 DBPQ10586 325 aaPredicted RBP5.66□□□□□ -1.5
SPG11-218ENST00000559754 Q6ZUG5 572 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms