RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 EIF3JO75822 258 aaKnown RBP11.34□□□□□ -0.59
SMAD3-211ENST00000559460 EIF2AK2P19525 551 aaKnown RBP11.34□□□□□ -0.59
SMAD3-211ENST00000559460 DMWDQ09019 674 aa11.34□□□□□ -0.59
SMAD3-211ENST00000559460 HIC1Q14526 733 aa11.34□□□□□ -0.59
SMAD3-211ENST00000559460 ACAP1Q15027 740 aa11.34□□□□□ -0.59
SMAD3-211ENST00000559460 CEP85Q6P2H3 762 aa11.34□□□□□ -0.59
SMAD3-211ENST00000559460 RUFY4Q6ZNE9 571 aa11.34□□□□□ -0.59
SMAD3-211ENST00000559460 MCF2L2Q86YR7 1114 aa11.34□□□□□ -0.59
SMAD3-211ENST00000559460 NPAS4Q8IUM7 802 aa11.34□□□□□ -0.59
SMAD3-211ENST00000559460 PLCD3Q8N3E9 789 aa11.34□□□□□ -0.59
SMAD3-211ENST00000559460 RGS22Q8NE09 1264 aa11.34□□□□□ -0.59
SMAD3-211ENST00000559460 SECISBP2LQ93073 1101 aaKnown RBP11.34□□□□□ -0.59
SMAD3-211ENST00000559460 S1PR5Q9H228 398 aa11.34□□□□□ -0.59
SMAD3-211ENST00000559460 RNPEPQ9H4A4 650 aa11.34□□□□□ -0.59
SMAD3-211ENST00000559460 NCDNQ9UBB6 729 aa11.34□□□□□ -0.59
SMAD3-211ENST00000559460 KMT2BQ9UMN6 2715 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-211ENST00000559460 ENPP3O14638 875 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 GGPS1O95749 300 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 ASGR2P07307 311 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 MTHFRP42898 656 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 ARHGAP4P98171 946 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 ITIH3Q06033 890 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 PPARAQ07869 468 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 HSDL1Q3SXM5 330 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 FAM26DQ5JW98 314 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 PLPP4Q5VZY2 271 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 THNSL1Q8IYQ7 743 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 TRMT2AQ8IZ69 625 aaKnown RBP11.33□□□□□ -0.6
SMAD3-211ENST00000559460 GPR161Q8N6U8 529 aaKnown RBP11.33□□□□□ -0.6
SMAD3-211ENST00000559460 VN1R2Q8NFZ6 395 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 APPBP2Q92624 585 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 CASP10Q92851 521 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 TAAR1Q96RJ0 339 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 OSBPL7Q9BZF2 842 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 MAF1Q9H063 256 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 SMOC2Q9H3U7 446 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 POMKQ9H5K3 350 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 EPB41L4AQ9HCS5 686 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-211ENST00000559460 ENTPD7Q9NQZ7 604 aa11.33□□□□□ -0.6
SMAD3-211ENST00000559460 ZNF215Q9UL58 517 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-211ENST00000559460 PATL2C9JE40 543 aaKnown RBP11.32□□□□□ -0.6
SMAD3-211ENST00000559460 PI15O43692 258 aa11.32□□□□□ -0.6
SMAD3-211ENST00000559460 RANBP6O60518 1105 aaKnown RBP11.32□□□□□ -0.6
SMAD3-211ENST00000559460 HOXD8P13378 290 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-211ENST00000559460 IBSPP21815 317 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-211ENST00000559460 CELF3Q5SZQ8 465 aaKnown RBP11.32□□□□□ -0.6
SMAD3-211ENST00000559460 TMEM184AQ6ZMB5 413 aa11.32□□□□□ -0.6
SMAD3-211ENST00000559460 IFNL3Q8IZI9 196 aa11.32□□□□□ -0.6
SMAD3-211ENST00000559460 RIN2Q8WYP3 895 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-211ENST00000559460 C16orf70Q9BSU1 422 aa11.32□□□□□ -0.6
SMAD3-211ENST00000559460 FTHL17Q9BXU8 183 aa11.32□□□□□ -0.6
SMAD3-211ENST00000559460 TOMM22Q9NS69 142 aa11.32□□□□□ -0.6
SMAD3-211ENST00000559460 SETD4Q9NVD3 440 aa11.32□□□□□ -0.6
SMAD3-211ENST00000559460 RNF216Q9NWF9 866 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-211ENST00000559460 TMEM260Q9NX78 707 aa11.32□□□□□ -0.6
SMAD3-211ENST00000559460 LIMD1Q9UGP4 676 aa11.32□□□□□ -0.6
SMAD3-211ENST00000559460 PUF60Q9UHX1 559 aaKnown RBP11.32□□□□□ -0.6
SMAD3-211ENST00000559460 DBR1Q9UK59 544 aaKnown RBP11.32□□□□□ -0.6
SMAD3-211ENST00000559460 ABCB11O95342 1321 aa11.32□□□□□ -0.6
SMAD3-211ENST00000559460 NCOR2Q9Y618 2525 aa11.32□□□□□ -0.6
SMAD3-211ENST00000559460 MYH7P12883 1935 aa11.31□□□□□ -0.6
SMAD3-211ENST00000559460 NMT2O60551 498 aa11.31□□□□□ -0.6
SMAD3-211ENST00000559460 KINO60870 393 aaKnown RBP11.31□□□□□ -0.6
SMAD3-211ENST00000559460 FGF18O76093 207 aa11.31□□□□□ -0.6
SMAD3-211ENST00000559460 LGALS2P05162 132 aa11.31□□□□□ -0.6
SMAD3-211ENST00000559460 ZFYP08048 801 aaPredicted RBP11.31□□□□□ -0.6
SMAD3-211ENST00000559460 NR3C2P08235 984 aa11.31□□□□□ -0.6
SMAD3-211ENST00000559460 MYCLP12524 364 aaPredicted RBP11.31□□□□□ -0.6
SMAD3-211ENST00000559460 HOXC8P31273 242 aa11.31□□□□□ -0.6
SMAD3-211ENST00000559460 CA8P35219 290 aa11.31□□□□□ -0.6
SMAD3-211ENST00000559460 MYSM1Q5VVJ2 828 aa11.31□□□□□ -0.6
SMAD3-211ENST00000559460 TAF2Q6P1X5 1199 aa11.31□□□□□ -0.6
SMAD3-211ENST00000559460 SYCE2Q6PIF2 218 aa11.31□□□□□ -0.6
SMAD3-211ENST00000559460 TSHZ1Q6ZSZ6 1077 aa11.31□□□□□ -0.6
SMAD3-211ENST00000559460 ZDHHC14Q8IZN3 488 aa11.31□□□□□ -0.6
SMAD3-211ENST00000559460 SIX5Q8N196 739 aa11.31□□□□□ -0.6
SMAD3-211ENST00000559460 DCLK2Q8N568 766 aa11.31□□□□□ -0.6
SMAD3-211ENST00000559460 SYTL5Q8TDW5 730 aaPredicted RBP11.31□□□□□ -0.6
SMAD3-211ENST00000559460 ACSF2Q96CM8 615 aaPredicted RBP11.31□□□□□ -0.6
SMAD3-211ENST00000559460 USP26Q9BXU7 913 aa11.31□□□□□ -0.6
SMAD3-211ENST00000559460 PRR5-ARHGAP8B1AHC4 643 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 M0QZ92 97 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 RAB11FIP3O75154 756 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 HMMRO75330 724 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 TOP1P11387 765 aaKnown RBP11.3□□□□□ -0.6
SMAD3-211ENST00000559460 SCG2P13521 617 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 ATXN1P54253 815 aaKnown RBP11.3□□□□□ -0.6
SMAD3-211ENST00000559460 ARHGAP8P85298 464 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 LMNB2Q03252 620 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 LPIN1Q14693 890 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 TMEM87AQ8NBN3 555 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 RASGRP4Q8TDF6 673 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 OSBP2Q969R2 916 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 TCF25Q9BQ70 676 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 RTKNQ9BST9 563 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 ADAM7Q9H2U9 754 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 CYP26B1Q9NR63 512 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 IL17RBQ9NRM6 502 aa11.3□□□□□ -0.6
SMAD3-211ENST00000559460 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
SMAD3-211ENST00000559460 RNF113AO15541 343 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms