RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 MAGEC3Q8TD91 643 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 SPAG5Q96R06 1193 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 CCDC113Q9H0I3 377 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 NDST4Q9H3R1 872 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 GREM2Q9H772 168 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 SLC39A2Q9NP94 309 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 PLCB1Q9NQ66 1216 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 ARFGEF2Q9Y6D5 1785 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 BAZ2BQ9UIF8 2168 aaKnown RBP5.55□□□□□ -1.52
HMG20A-204ENST00000558288 ABCC12Q96J65 1359 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 CCDC194A0A1B0GVG4 234 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 A0A1W2PQJ5 194 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 TCRBV5S4A2TA0A5A2 114 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 HGSO14964 777 aaPredicted RBP5.55□□□□□ -1.52
HMG20A-204ENST00000558288 RAD17O75943 681 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 ALDH1B1P30837 517 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 EPHX2P34913 555 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 SLC8A3P57103 927 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 ERVK-9P63128 1117 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 CDK17Q00537 523 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 STK4Q13043 487 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 BIRC3Q13489 604 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 VWA3BQ502W6 1294 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 MIIPQ5JXC2 388 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 SOGA3Q5TF21 947 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 CAPRIN2Q6IMN6 1127 aaKnown RBP5.55□□□□□ -1.52
HMG20A-204ENST00000558288 TLDC1Q6P9B6 456 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 LRIG3Q6UXM1 1119 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 ARMC9Q7Z3E5 817 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 GIMAP8Q8ND71 665 aaPredicted RBP5.55□□□□□ -1.52
HMG20A-204ENST00000558288 LMBR1Q8WVP7 490 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 ZBTB10Q96DT7 871 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 HOOK2Q96ED9 719 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 SAAL1Q96ER3 474 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 CHMP6Q96FZ7 201 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 NLRP3Q96P20 1036 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 ERGIC2Q96RQ1 377 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 ZSCAN10Q96SZ4 725 aaPredicted RBP5.55□□□□□ -1.52
HMG20A-204ENST00000558288 YIPF3Q9GZM5 350 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 DPH5Q9H2P9 285 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 SAMD15Q9P1V8 674 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 GGT7Q9UJ14 662 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 IQSEC3Q9UPP2 1182 aaPredicted RBP5.55□□□□□ -1.52
HMG20A-204ENST00000558288 STK38LQ9Y2H1 464 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 EME2A4GXA9 379 aaPredicted RBP5.54□□□□□ -1.52
HMG20A-204ENST00000558288 CCT8L1PA6NM43 557 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 SMIM22K7EJ46 135 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 SNAP23O00161 211 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 MGRN1O60291 552 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 DIAPH2O60879 1101 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 DNAJC8O75937 253 aaPredicted RBP5.54□□□□□ -1.52
HMG20A-204ENST00000558288 RHOBTB3O94955 611 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 KIF4AO95239 1232 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 KCNB1Q14721 858 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 KIAA0753Q2KHM9 967 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 SLC9C1Q4G0N8 1177 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 TAX1BP1Q86VP1 789 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 ENAHQ8N8S7 591 aaPredicted RBP5.54□□□□□ -1.52
HMG20A-204ENST00000558288 TTLL11Q8NHH1 800 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 TATDN2Q93075 761 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 PSMD1Q99460 953 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 PLCD4Q9BRC7 762 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 FAM167BQ9BTA0 163 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 GOLPH3Q9H4A6 298 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 ABCF2Q9UG63 623 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 SLC12A6Q9UHW9 1150 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 TRMT112Q9UI30 125 aaKnown RBP5.54□□□□□ -1.52
HMG20A-204ENST00000558288 TRPC6Q9Y210 931 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 CYP2D7A0A087X1C5 515 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 ORC4O43929 436 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 RTN2O75298 545 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 NPR1P16066 1061 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 KLRC1P26715 233 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 IFNAR2P48551 515 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 MAP2K1Q02750 393 aaPredicted RBP5.54□□□□□ -1.52
HMG20A-204ENST00000558288 DHX9Q08211 1270 aaKnown RBP5.54□□□□□ -1.52
HMG20A-204ENST00000558288 MTMR3Q13615 1198 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 RAPGEF1Q13905 1077 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 RPS6KA1Q15418 735 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 DEFB115Q30KQ5 88 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 RCSD1Q6JBY9 416 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 CCDC84Q86UT8 332 aaPredicted RBP5.54□□□□□ -1.52
HMG20A-204ENST00000558288 C3orf20Q8ND61 904 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 CCT6BQ92526 530 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 GPKOWQ92917 476 aaPredicted RBP eCLIP5.54□□□□□ -1.52
HMG20A-204ENST00000558288 ELAC2Q9BQ52 826 aaKnown RBP5.54□□□□□ -1.52
HMG20A-204ENST00000558288 DDX47Q9H0S4 455 aaKnown RBP5.54□□□□□ -1.52
HMG20A-204ENST00000558288 ISCUQ9H1K1 167 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 KDM4CQ9H3R0 1056 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 TCP11L1Q9NUJ3 509 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 NOP53Q9NZM5 478 aaKnown RBP5.54□□□□□ -1.52
HMG20A-204ENST00000558288 FBXO3Q9UK99 471 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 PNMA2Q9UL42 364 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 ATP8A1Q9Y2Q0 1164 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 C15orf41Q9Y2V0 281 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 DDX60Q8IY21 1712 aaKnown RBP5.54□□□□□ -1.52
HMG20A-204ENST00000558288 GRID2IPA4D2P6 1211 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 SRRM3A6NNA2 597 aaPredicted RBP5.54□□□□□ -1.52
HMG20A-204ENST00000558288 ADAMTS3O15072 1205 aa5.54□□□□□ -1.52
HMG20A-204ENST00000558288 DAPK3O43293 454 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms