RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 FER1L4A9Z1Z3 1794 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 C2orf71A6NGG8 1288 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 ABLIM1O14639 778 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 KCNH1O95259 989 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 NAT2P11245 290 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 PAX3P23760 479 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 PPP2R1AP30153 589 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 L1CAMP32004 1257 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 CORO7P57737 925 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 LINC00310P59036 64 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 AMPD3Q01432 767 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 CNGB1Q14028 1251 aaPredicted RBP6.45□□□□□ -1.38
SRP54-211ENST00000556445 WDR43Q15061 677 aaKnown RBP eCLIP6.45□□□□□ -1.38
SRP54-211ENST00000556445 LONRF3Q496Y0 759 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 PLEKHG4Q58EX7 1191 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 MRM1Q6IN84 353 aaKnown RBP6.45□□□□□ -1.38
SRP54-211ENST00000556445 MRGPRX3Q96LB0 322 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 LGR4Q9BXB1 951 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 PDLIM7Q9NR12 457 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 PRKAB1Q9Y478 270 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 PTPRMP28827 1452 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 UBR1Q8IWV7 1749 aa6.45□□□□□ -1.38
SRP54-211ENST00000556445 TMEM2Q9UHN6 1383 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 FAM135BQ49AJ0 1406 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 SMG6Q86US8 1419 aaKnown RBP6.44□□□□□ -1.38
SRP54-211ENST00000556445 NUDT19A8MXV4 375 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 SH3BP5O60239 455 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 SEPHS1P49903 392 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 EPHB3P54753 998 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 CYP4F3Q08477 520 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 BIRC2Q13490 618 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 SERINC3Q13530 473 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 RAB3GAP1Q15042 981 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 RPTNQ6XPR3 784 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 LCNL1Q6ZST4 164 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 HDGFL2Q7Z4V5 671 aaPredicted RBP6.44□□□□□ -1.38
SRP54-211ENST00000556445 TRIM59Q8IWR1 403 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 THEMISQ8N1K5 641 aaPredicted RBP6.44□□□□□ -1.38
SRP54-211ENST00000556445 COPS5Q92905 334 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 RNPC3Q96LT9 517 aaKnown RBP6.44□□□□□ -1.38
SRP54-211ENST00000556445 RPS6KC1Q96S38 1066 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 TYW1Q9NV66 732 aaKnown RBP6.44□□□□□ -1.38
SRP54-211ENST00000556445 GEMIN8Q9NWZ8 242 aaKnown RBP6.44□□□□□ -1.38
SRP54-211ENST00000556445 NUDCQ9Y266 331 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 KNDC1Q76NI1 1749 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 PLEKHG1Q9ULL1 1385 aa6.44□□□□□ -1.38
SRP54-211ENST00000556445 TECPR2O15040 1411 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 BLMP54132 1417 aaPredicted RBP6.43□□□□□ -1.38
SRP54-211ENST00000556445 NSD3Q9BZ95 1437 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 SETD1AO15047 1707 aaKnown RBP6.43□□□□□ -1.38
SRP54-211ENST00000556445 A0A1W2PQ27 194 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 A0A1W2PQ64 194 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 A0A1W2PQC6 194 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 A0A1W2PQD8 194 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 SRGAP3O43295 1099 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 PRC1O43663 620 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 SUSD5O60279 629 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 DBHP09172 617 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 PDGFRBP09619 1106 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 CDR1P51861 262 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 KRTAP19-4Q3LI73 84 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 PLEKHN1Q494U1 663 aaPredicted RBP6.43□□□□□ -1.38
SRP54-211ENST00000556445 ZFYVE27Q5T4F4 411 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 NBPF6Q5VWK0 638 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 OLFML2BQ68BL8 750 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 GTF2IRD2BQ6EKJ0 949 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 POMZP3Q6PJE2 187 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 GTF2IRD2Q86UP8 949 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 MORC1Q86VD1 984 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 CRACR2BQ8N4Y2 399 aaPredicted RBP6.43□□□□□ -1.38
SRP54-211ENST00000556445 JDP2Q8WYK2 163 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 MKL1Q969V6 931 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 CCDC136Q96JN2 1154 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 NBPF4Q96M43 638 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 CFAP53Q96M91 514 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 PRAM1Q96QH2 718 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 SIRT5Q9NXA8 310 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 STK26Q9P289 416 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 FBLN5Q9UBX5 448 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 TULP4Q9NRJ4 1543 aa6.43□□□□□ -1.38
SRP54-211ENST00000556445 POLR3AO14802 1390 aaPredicted RBP6.43□□□□□ -1.38
SRP54-211ENST00000556445 C3P01024 1663 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 MED14O60244 1454 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 SLIT1O75093 1534 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 CPS1P31327 1500 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 NOP56O00567 594 aaKnown RBP6.42□□□□□ -1.38
SRP54-211ENST00000556445 PPP1R12AO14974 1030 aaPredicted RBP6.42□□□□□ -1.38
SRP54-211ENST00000556445 TBX1O43435 398 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 PPP1R11O60927 126 aaPredicted RBP6.42□□□□□ -1.38
SRP54-211ENST00000556445 CYBBP04839 570 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 TACR1P25103 407 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 MAPKAPK2P49137 400 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 TMEM62Q0P6H9 643 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 SSPNQ14714 243 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 FXNQ16595 210 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 CLEC4GQ6UXB4 293 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 TMC6Q7Z403 805 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 CPNE8Q86YQ8 564 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 GPATCH11Q8N954 259 aa6.42□□□□□ -1.38
SRP54-211ENST00000556445 ZSCAN18Q8TBC5 510 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms