RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 COA1Q9GZY4 146 aa5.71□□□□□ -1.5
ATXN3-237ENST00000556274 CHMP4BQ9H444 224 aaKnown RBP5.71□□□□□ -1.5
ATXN3-237ENST00000556274 TAF1DQ9H5J8 278 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-237ENST00000556274 ZNF408Q9H9D4 720 aa5.71□□□□□ -1.5
ATXN3-237ENST00000556274 CD209Q9NNX6 404 aa5.71□□□□□ -1.5
ATXN3-237ENST00000556274 PRDM10Q9NQV6 1147 aa5.71□□□□□ -1.5
ATXN3-237ENST00000556274 GPRC5DQ9NZD1 345 aa5.71□□□□□ -1.5
ATXN3-237ENST00000556274 TJP2Q9UDY2 1190 aa5.71□□□□□ -1.5
ATXN3-237ENST00000556274 RNF112Q9ULX5 631 aa5.71□□□□□ -1.5
ATXN3-237ENST00000556274 DDX19BQ9UMR2 479 aa5.71□□□□□ -1.5
ATXN3-237ENST00000556274 AKAP11Q9UKA4 1901 aa5.71□□□□□ -1.5
ATXN3-237ENST00000556274 DUOX1Q9NRD9 1551 aa5.71□□□□□ -1.5
ATXN3-237ENST00000556274 CDK5RAP2Q96SN8 1893 aa5.71□□□□□ -1.5
ATXN3-237ENST00000556274 PNMA6EA0A0J9YXQ4 647 aa5.7□□□□□ -1.5
ATXN3-237ENST00000556274 LRIG2O94898 1065 aa5.7□□□□□ -1.5
ATXN3-237ENST00000556274 HTR3BO95264 441 aa5.7□□□□□ -1.5
ATXN3-237ENST00000556274 VIL1P09327 827 aaKnown RBP5.7□□□□□ -1.5
ATXN3-237ENST00000556274 IL15P40933 162 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-237ENST00000556274 RFX5P48382 616 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-237ENST00000556274 IRX6P78412 446 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-237ENST00000556274 HTRA3P83110 453 aa5.7□□□□□ -1.5
ATXN3-237ENST00000556274 GRM1Q13255 1194 aa5.7□□□□□ -1.5
ATXN3-237ENST00000556274 MVPQ14764 893 aaKnown RBP5.7□□□□□ -1.5
ATXN3-237ENST00000556274 ATP2B3Q16720 1220 aa5.7□□□□□ -1.5
ATXN3-237ENST00000556274 RABL6Q3YEC7 729 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-237ENST00000556274 MCATQ8IVS2 390 aaKnown RBP5.7□□□□□ -1.5
ATXN3-237ENST00000556274 CNTROBQ8N137 903 aa5.7□□□□□ -1.5
ATXN3-237ENST00000556274 DCPSQ96C86 337 aaKnown RBP5.7□□□□□ -1.5
ATXN3-237ENST00000556274 ACSF2Q96CM8 615 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-237ENST00000556274 TMEM87BQ96K49 555 aa5.7□□□□□ -1.5
ATXN3-237ENST00000556274 FAM84BQ96KN1 310 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-237ENST00000556274 DPH2Q9BQC3 489 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-237ENST00000556274 TGIF2Q9GZN2 237 aa5.7□□□□□ -1.5
ATXN3-237ENST00000556274 LRRC4CQ9HCJ2 640 aa5.7□□□□□ -1.5
ATXN3-237ENST00000556274 ADARB2Q9NS39 739 aaKnown RBP5.7□□□□□ -1.5
ATXN3-237ENST00000556274 GNL3LQ9NVN8 582 aaKnown RBP5.7□□□□□ -1.5
ATXN3-237ENST00000556274 ADAM30Q9UKF2 790 aa5.7□□□□□ -1.5
ATXN3-237ENST00000556274 HDAC9Q9UKV0 1011 aa5.7□□□□□ -1.5
ATXN3-237ENST00000556274 SCAF8Q9UPN6 1271 aaKnown RBP5.7□□□□□ -1.5
ATXN3-237ENST00000556274 PCDHB14Q9Y5E9 798 aa5.7□□□□□ -1.5
ATXN3-237ENST00000556274 MYH7P12883 1935 aa5.7□□□□□ -1.5
ATXN3-237ENST00000556274 MED23Q9ULK4 1368 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 UPK3BL1B0FP48 263 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 UPK3BL2E5RIL1 263 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 CYP26A1O43174 497 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 HMMRO75330 724 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 CST3P01034 146 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-237ENST00000556274 ERCC5P28715 1186 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-237ENST00000556274 SSTR4P31391 388 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 GRIK1P39086 918 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 CAP2P40123 477 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 ZNF165P49910 485 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 FSTL1Q12841 308 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 PAK2Q13177 524 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 PUM3Q15397 648 aaKnown RBP5.69□□□□□ -1.5
ATXN3-237ENST00000556274 STRIP1Q5VSL9 837 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 PRAMEF13Q5VWM6 474 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 SLC6A19Q695T7 634 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 GK5Q6ZS86 529 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 USP50Q70EL3 339 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-237ENST00000556274 ATG9AQ7Z3C6 839 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 LDHDQ86WU2 507 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 SLITRK4Q8IW52 837 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 MRPL41Q8IXM3 137 aaKnown RBP5.69□□□□□ -1.5
ATXN3-237ENST00000556274 MFSD2AQ8NA29 543 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 FAM13CQ8NE31 585 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 LPIN2Q92539 896 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 CCDC8Q9H0W5 538 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-237ENST00000556274 CCSER2Q9H7U1 834 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 REV1Q9UBZ9 1251 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 KLHL3Q9UH77 587 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 EXOC6BQ9Y2D4 811 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 ADAMTSL1Q8N6G6 1762 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 UTRNP46939 3433 aa5.69□□□□□ -1.5
ATXN3-237ENST00000556274 ZNF646O15015 1829 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-237ENST00000556274 MYH1P12882 1939 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 MYH8P13535 1937 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 TRAF5O00463 557 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 CIAO1O76071 339 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 SASH1O94885 1247 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 HSPA6P17066 643 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 RPS12P25398 132 aaKnown RBP5.68□□□□□ -1.5
ATXN3-237ENST00000556274 ADORA1P30542 326 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 YARSP54577 528 aaKnown RBP5.68□□□□□ -1.5
ATXN3-237ENST00000556274 RRP1P56182 461 aaKnown RBP5.68□□□□□ -1.5
ATXN3-237ENST00000556274 RAD51AP2Q09MP3 1159 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 FZD5Q13467 585 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 PRKG1Q13976 671 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 DLGAP5Q15398 846 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 CPSF6Q16630 551 aaKnown RBP eCLIP5.68□□□□□ -1.5
ATXN3-237ENST00000556274 TMEM201Q5SNT2 666 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 MFSD14BQ5SR56 506 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 TTC39AQ5SRH9 613 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 DLK2Q6UY11 383 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 REXO1Q8N1G1 1221 aaKnown RBP5.68□□□□□ -1.5
ATXN3-237ENST00000556274 AGBL3Q8NEM8 1001 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 DPF2Q92785 391 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 CRBNQ96SW2 442 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 MIPEPQ99797 713 aa5.68□□□□□ -1.5
ATXN3-237ENST00000556274 GLIS2Q9BZE0 524 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms