RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 KARSQ15046 597 aaKnown RBP16.12■□□□□ 0.17
SHOX2-206ENST00000554685 HYIQ5T013 277 aa16.12■□□□□ 0.17
SHOX2-206ENST00000554685 PDILTQ8N807 584 aa16.12■□□□□ 0.17
SHOX2-206ENST00000554685 DHX58Q96C10 678 aa16.12■□□□□ 0.17
SHOX2-206ENST00000554685 ARHGAP39Q9C0H5 1083 aa16.12■□□□□ 0.17
SHOX2-206ENST00000554685 SAMM50Q9Y512 469 aa16.12■□□□□ 0.17
SHOX2-206ENST00000554685 DDX39AO00148 427 aaKnown RBP16.11■□□□□ 0.17
SHOX2-206ENST00000554685 NKRFO15226 690 aaKnown RBP eCLIP16.11■□□□□ 0.17
SHOX2-206ENST00000554685 SNAI1O95863 264 aaPredicted RBP16.11■□□□□ 0.17
SHOX2-206ENST00000554685 UBA1P22314 1058 aaKnown RBP16.11■□□□□ 0.17
SHOX2-206ENST00000554685 FLT3LGP49771 235 aa16.11■□□□□ 0.17
SHOX2-206ENST00000554685 ACVR2BQ13705 512 aa16.11■□□□□ 0.17
SHOX2-206ENST00000554685 ZRSR1Q15695 479 aaKnown RBP16.11■□□□□ 0.17
SHOX2-206ENST00000554685 MFSD14CQ5VZR4 134 aa16.11■□□□□ 0.17
SHOX2-206ENST00000554685 IQSEC1Q6DN90 963 aa16.11■□□□□ 0.17
SHOX2-206ENST00000554685 METTL7BQ6UX53 244 aa16.11■□□□□ 0.17
SHOX2-206ENST00000554685 KRBA2Q6ZNG9 492 aa16.11■□□□□ 0.17
SHOX2-206ENST00000554685 CD99L2Q8TCZ2 262 aa16.11■□□□□ 0.17
SHOX2-206ENST00000554685 EIF2AK1Q9BQI3 630 aaKnown RBP16.11■□□□□ 0.17
SHOX2-206ENST00000554685 MMTAG2Q9BU76 263 aaKnown RBP16.11■□□□□ 0.17
SHOX2-206ENST00000554685 TNMDQ9H2S6 317 aa16.11■□□□□ 0.17
SHOX2-206ENST00000554685 MLXIPQ9HAP2 919 aa16.11■□□□□ 0.17
SHOX2-206ENST00000554685 DDX41Q9UJV9 622 aaKnown RBP16.11■□□□□ 0.17
SHOX2-206ENST00000554685 ZHX1Q9UKY1 873 aaPredicted RBP16.11■□□□□ 0.17
SHOX2-206ENST00000554685 EML1O00423 815 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 GGPS1O95749 300 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 P4HBP07237 508 aaKnown RBP16.1■□□□□ 0.17
SHOX2-206ENST00000554685 PSAPP07602 524 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 TXNP10599 105 aaKnown RBP16.1■□□□□ 0.17
SHOX2-206ENST00000554685 PLCG1P19174 1290 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 PRKCZQ05513 592 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 E2F4Q16254 413 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 TMEM119Q4V9L6 283 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 TAPT1Q6NXT6 567 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 MIS18BP1Q6P0N0 1132 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 CCDC62Q6P9F0 684 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 DHX37Q8IY37 1157 aaKnown RBP16.1■□□□□ 0.17
SHOX2-206ENST00000554685 PANK2Q9BZ23 570 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 LRRC27Q9C0I9 530 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 KATNBL1Q9H079 304 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 TMEM63CQ9P1W3 806 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 SRRDQ9UH36 339 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 PCDHA10Q9Y5I2 948 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 MGAMO43451 1857 aa16.1■□□□□ 0.17
SHOX2-206ENST00000554685 A0A087X0B3 334 aa16.09■□□□□ 0.17
SHOX2-206ENST00000554685 ACTN4O43707 911 aaKnown RBP16.09■□□□□ 0.17
SHOX2-206ENST00000554685 GH1P01241 217 aa16.09■□□□□ 0.17
SHOX2-206ENST00000554685 MYL1P05976 194 aa16.09■□□□□ 0.17
SHOX2-206ENST00000554685 AMPD3Q01432 767 aa16.09■□□□□ 0.17
SHOX2-206ENST00000554685 GRB10Q13322 594 aa16.09■□□□□ 0.17
SHOX2-206ENST00000554685 MKRN4PQ13434 485 aaPredicted RBP16.09■□□□□ 0.17
SHOX2-206ENST00000554685 LONRF3Q496Y0 759 aa16.09■□□□□ 0.17
SHOX2-206ENST00000554685 CELF3Q5SZQ8 465 aaKnown RBP16.09■□□□□ 0.17
SHOX2-206ENST00000554685 CYFIP1Q7L576 1253 aa16.09■□□□□ 0.17
SHOX2-206ENST00000554685 ATP6V0A1Q93050 837 aa16.09■□□□□ 0.17
SHOX2-206ENST00000554685 HSD17B14Q9BPX1 270 aa16.09■□□□□ 0.17
SHOX2-206ENST00000554685 ZSWIM4Q9H7M6 989 aa16.09■□□□□ 0.17
SHOX2-206ENST00000554685 SERTAD1Q9UHV2 236 aa16.09■□□□□ 0.17
SHOX2-206ENST00000554685 GABRQQ9UN88 632 aa16.09■□□□□ 0.17
SHOX2-206ENST00000554685 NOP56O00567 594 aaKnown RBP16.08■□□□□ 0.16
SHOX2-206ENST00000554685 MED24O75448 989 aa16.08■□□□□ 0.16
SHOX2-206ENST00000554685 FARP2O94887 1054 aaPredicted RBP16.08■□□□□ 0.16
SHOX2-206ENST00000554685 CCNE2O96020 404 aa16.08■□□□□ 0.16
SHOX2-206ENST00000554685 QARSP47897 775 aaKnown RBP16.08■□□□□ 0.16
SHOX2-206ENST00000554685 ACTR2P61160 394 aa16.08■□□□□ 0.16
SHOX2-206ENST00000554685 SP2Q02086 613 aa16.08■□□□□ 0.16
SHOX2-206ENST00000554685 LAMC2Q13753 1193 aa16.08■□□□□ 0.16
SHOX2-206ENST00000554685 LY6KQ17RY6 165 aa16.08■□□□□ 0.16
SHOX2-206ENST00000554685 CATSPER3Q86XQ3 398 aa16.08■□□□□ 0.16
SHOX2-206ENST00000554685 ZNF296Q8WUU4 475 aaPredicted RBP16.08■□□□□ 0.16
SHOX2-206ENST00000554685 SEPT1Q8WYJ6 367 aa16.08■□□□□ 0.16
SHOX2-206ENST00000554685 DYDC2Q96IM9 177 aa16.08■□□□□ 0.16
SHOX2-206ENST00000554685 PNMA5Q96PV4 448 aa16.08■□□□□ 0.16
SHOX2-206ENST00000554685 WBP1LQ9NX94 342 aa16.08■□□□□ 0.16
SHOX2-206ENST00000554685 FLRT1Q9NZU1 646 aa16.08■□□□□ 0.16
SHOX2-206ENST00000554685 DNM3Q9UQ16 869 aa16.08■□□□□ 0.16
SHOX2-206ENST00000554685 KIAA1217Q5T5P2 1943 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 POTEB3A0JP26 581 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 LYPLA2O95372 231 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 ARIH2O95376 493 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 IGHA2P01877 340 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 SUPT20HL2P0C7V6 817 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 SPATA31C1P0DKV0 1188 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 CYP2C19P33261 490 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 PSMC5P62195 406 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 CCL14Q16627 93 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 DUSP28Q4G0W2 176 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 PDXDC2PQ6P474 469 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 POTEBQ6S5H4 581 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 SV2BQ7L1I2 683 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 RAET1EQ8TD07 263 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 LARP4BQ92615 738 aaKnown RBP16.07■□□□□ 0.16
SHOX2-206ENST00000554685 RAD54LQ92698 747 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 EMID1Q96A84 441 aaPredicted RBP16.07■□□□□ 0.16
SHOX2-206ENST00000554685 NACC1Q96RE7 527 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 LXNQ9BS40 222 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 PDGFCQ9NRA1 345 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 FAM184BQ9ULE4 1060 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 KIAA1024Q9UPX6 916 aa16.07■□□□□ 0.16
SHOX2-206ENST00000554685 CASP8AP2Q9UKL3 1982 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms