RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 EDRF1Q3B7T1 1238 aa9.61□□□□□ -0.87
TDP1-204ENST00000545686 ASPRV1Q53RT3 343 aa9.61□□□□□ -0.87
TDP1-204ENST00000545686 USP17L2Q6R6M4 530 aa9.61□□□□□ -0.87
TDP1-204ENST00000545686 TMC4Q7Z404 712 aa9.61□□□□□ -0.87
TDP1-204ENST00000545686 CCDC65Q8IXS2 484 aa9.61□□□□□ -0.87
TDP1-204ENST00000545686 MYCBPAPQ8TBZ2 947 aa9.61□□□□□ -0.87
TDP1-204ENST00000545686 NAP1L4Q99733 375 aaKnown RBP9.61□□□□□ -0.87
TDP1-204ENST00000545686 PANK4Q9NVE7 773 aa9.61□□□□□ -0.87
TDP1-204ENST00000545686 TMEM260Q9NX78 707 aa9.61□□□□□ -0.87
TDP1-204ENST00000545686 MTMR7Q9Y216 660 aa9.61□□□□□ -0.87
TDP1-204ENST00000545686 PLAAQ9Y263 795 aa9.61□□□□□ -0.87
TDP1-204ENST00000545686 CAPN7Q9Y6W3 813 aa9.61□□□□□ -0.87
TDP1-204ENST00000545686 A0A087X0T9 212 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 CCDC188H7C350 402 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 GCOM1H8Y6P7 765 aaPredicted RBP9.6□□□□□ -0.87
TDP1-204ENST00000545686 KIF4AO95239 1232 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 FAM228BP0C875 321 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 MYZAPP0CAP1 466 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 PLCG2P16885 1265 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 GUCY2FP51841 1108 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 GUCY1A3Q02108 690 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 RAPGEF1Q13905 1077 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 RUFY4Q6ZNE9 571 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 KCNK18Q7Z418 384 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 TXNRD3Q86VQ6 643 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 SCFD2Q8WU76 684 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 CCT8L2Q96SF2 557 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 RTFDC1Q9BY42 306 aaPredicted RBP9.6□□□□□ -0.87
TDP1-204ENST00000545686 CPVLQ9H3G5 476 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 LEMD3Q9Y2U8 911 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 SPATA31A1Q5TZJ5 1347 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 H0YHG0 523 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 ECHS1P30084 290 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 PDE4CQ08493 712 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 LRRC41Q15345 812 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 CEP85LQ5SZL2 805 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 AGBL2Q5U5Z8 902 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 FBXW10Q5XX13 1052 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 TBC1D9BQ66K14 1250 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 C15orf52Q6ZUT6 534 aaKnown RBP9.6□□□□□ -0.87
TDP1-204ENST00000545686 ARMC9Q7Z3E5 817 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 MAATS1Q7Z4T9 603 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 MAPKAPK5Q8IW41 473 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 PLCD3Q8N3E9 789 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 GLIS3Q8NEA6 775 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 ACSBG1Q96GR2 724 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 MYCBPQ99417 103 aaPredicted RBP9.6□□□□□ -0.87
TDP1-204ENST00000545686 TACO1Q9BSH4 297 aaKnown RBP9.6□□□□□ -0.87
TDP1-204ENST00000545686 RABEP2Q9H5N1 569 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 VCPKMTQ9H867 229 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 PCDHA2Q9Y5H9 948 aa9.6□□□□□ -0.87
TDP1-204ENST00000545686 PGRMC1O00264 195 aaKnown RBP9.59□□□□□ -0.87
TDP1-204ENST00000545686 EDIL3O43854 480 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 PAEPP09466 180 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 PDHBP11177 359 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 HSD17B3P37058 310 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 EPS15P42566 896 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 ERVK-9P63128 1117 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 SPDYCQ5MJ68 293 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 C6orf89Q6UWU4 347 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 ZNF804AQ7Z570 1209 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 RPAINQ86UA6 219 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 LRRC57Q8N9N7 239 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 MARCH10Q8NA82 808 aaPredicted RBP9.59□□□□□ -0.87
TDP1-204ENST00000545686 CEP95Q96GE4 821 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 NUDT12Q9BQG2 462 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.59□□□□□ -0.87
TDP1-204ENST00000545686 KCTD10Q9H3F6 313 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 SLITRK6Q9H5Y7 841 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 ACTR5Q9H9F9 607 aaPredicted RBP9.59□□□□□ -0.87
TDP1-204ENST00000545686 PITPNM2Q9BZ72 1349 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 TAF1LQ8IZX4 1826 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 QSER1Q2KHR3 1735 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 A0A0A6YYK5 440 aaPredicted RBP9.59□□□□□ -0.87
TDP1-204ENST00000545686 FRMD3A2A2Y4 597 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 H0YGN5 161 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 KCNK3O14649 394 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 SNHG28P0DPA3 235 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 PRKCIP41743 596 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 CLK2P49760 499 aaKnown RBP9.59□□□□□ -0.87
TDP1-204ENST00000545686 MNAT1P51948 309 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 GSCP56915 257 aaPredicted RBP9.59□□□□□ -0.87
TDP1-204ENST00000545686 ACTN3Q08043 901 aaPredicted RBP9.59□□□□□ -0.87
TDP1-204ENST00000545686 DIXDC1Q155Q3 683 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 FAM133AQ8N9E0 248 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 LINC00116Q8NCU8 138 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.59□□□□□ -0.872e-6■■□□□ 12.6
TDP1-204ENST00000545686 SWAP70Q9UH65 585 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 ADAMTS1Q9UHI8 967 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 DDX25Q9UHL0 483 aaKnown RBP9.59□□□□□ -0.87
TDP1-204ENST00000545686 NARFQ9UHQ1 456 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 SAP30BPQ9UHR5 308 aaKnown RBP9.59□□□□□ -0.87
TDP1-204ENST00000545686 SLC12A6Q9UHW9 1150 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 FBXL5Q9UKA1 691 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 INTUQ9ULD6 942 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 JAG2Q9Y219 1238 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 NFS1Q9Y697 457 aa9.59□□□□□ -0.87
TDP1-204ENST00000545686 LOXHD1Q8IVV2 1947 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 GPR75-ASB3A0A0A6YYF3 556 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 A0A0G2JS52 829 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms