RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 SPATA5Q8NB90 893 aa6.51□□□□□ -1.37
PRKDC-209ENST00000540819 C1orf162Q8NEQ5 155 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-209ENST00000540819 IL17REQ8NFR9 667 aa6.51□□□□□ -1.37
PRKDC-209ENST00000540819 PTPRN2Q92932 1015 aa6.51□□□□□ -1.37
PRKDC-209ENST00000540819 FAXDC2Q96IV6 333 aa6.51□□□□□ -1.37
PRKDC-209ENST00000540819 DHRS1Q96LJ7 313 aa6.51□□□□□ -1.37
PRKDC-209ENST00000540819 WNT10AQ9GZT5 417 aa6.51□□□□□ -1.37
PRKDC-209ENST00000540819 SAGE1Q9NXZ1 904 aa6.51□□□□□ -1.37
PRKDC-209ENST00000540819 SUSD2Q9UGT4 822 aa6.51□□□□□ -1.37
PRKDC-209ENST00000540819 TACC3Q9Y6A5 838 aa6.51□□□□□ -1.37
PRKDC-209ENST00000540819 SNCAIPQ9Y6H5 919 aa6.51□□□□□ -1.37
PRKDC-209ENST00000540819 WASHC2AQ641Q2 1341 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 FAM86C2PA6NEL3 165 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 PRR33A8MZF0 331 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 FIBPO43427 364 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 HIP1RO75146 1068 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 RHOBTB3O94955 611 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 FKBP9O95302 570 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 APPP05067 770 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 RBP3P10745 1247 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 RAC2P15153 192 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 USP14P54578 494 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 GPSM2P81274 684 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 LONRF1Q17RB8 773 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 ATP13A4Q4VNC1 1196 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 CCDC184Q52MB2 194 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 TMEM201Q5SNT2 666 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 PIK3R6Q5UE93 754 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 HEATR6Q6AI08 1181 aaKnown RBP6.5□□□□□ -1.37
PRKDC-209ENST00000540819 ZCCHC8Q6NZY4 707 aaKnown RBP6.5□□□□□ -1.37
PRKDC-209ENST00000540819 CFAP161Q6P656 301 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 LRFN4Q6PJG9 635 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 C22orf34Q6ZV56 151 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 FKBP9P1Q75LS8 142 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 MAMDC2Q7Z304 686 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-209ENST00000540819 MAATS1Q7Z4T9 603 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 SRGAP1Q7Z6B7 1085 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 HID1Q8IV36 788 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 FBXO15Q8NCQ5 510 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-209ENST00000540819 UBE2FQ969M7 185 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 AHCYL2Q96HN2 611 aaKnown RBP6.5□□□□□ -1.37
PRKDC-209ENST00000540819 TTC14Q96N46 770 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 CORINQ9Y5Q5 1042 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 MRFAP1Q9Y605 127 aa6.5□□□□□ -1.37
PRKDC-209ENST00000540819 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-209ENST00000540819 IL33O95760 270 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 TMEM253P0C7T8 217 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 ZNF865P0CJ78 1059 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-209ENST00000540819 HSD3B1P14060 373 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 PLCG1P19174 1290 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 ADCYAP1R1P41586 468 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 GRIA2P42262 883 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 TM4SF4P48230 202 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 PMS1P54277 932 aaKnown RBP6.49□□□□□ -1.37
PRKDC-209ENST00000540819 PDE4BQ07343 736 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 SLBPQ14493 270 aaKnown RBP eCLIP6.49□□□□□ -1.37
PRKDC-209ENST00000540819 WIPI1Q5MNZ9 446 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-209ENST00000540819 MZT2BQ6NZ67 158 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 LETMD1Q6P1Q0 360 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 B3GNT9Q6UX72 402 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 LDHAL6AQ6ZMR3 332 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 THAP5Q7Z6K1 395 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 LRRC56Q8IYG6 542 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-209ENST00000540819 SMC1BQ8NDV3 1235 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 SLC35G2Q8TBE7 412 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 CCT6BQ92526 530 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 PPP1R14AQ96A00 147 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 PLPPR2Q96GM1 343 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 DIRC2Q96SL1 478 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 KRTAP4-9Q9BYQ8 210 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 SLC12A5Q9H2X9 1139 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 ZSWIM5Q9P217 1185 aa6.49□□□□□ -1.37
PRKDC-209ENST00000540819 hCG_1642624A0A1W2PR95 340 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 TLR5O60602 858 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 CTNND1O60716 968 aaKnown RBP6.48□□□□□ -1.37
PRKDC-209ENST00000540819 SNX2O60749 519 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 DNAJA2O60884 412 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 AGR2O95994 175 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 EPHX1P07099 455 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 SLC5A1P13866 664 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 RAG1P15918 1043 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 TNFAIP3P21580 790 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 RRM1P23921 792 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 CAP2P40123 477 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 LSSP48449 732 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 CDK8P49336 464 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 OCRLQ01968 901 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 DSG1Q02413 1049 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 BTKQ06187 659 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 TOMM20Q15388 145 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 SKOR2Q2VWA4 1001 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-209ENST00000540819 PRR16Q569H4 304 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 FAM133BQ5BKY9 247 aaKnown RBP6.48□□□□□ -1.37
PRKDC-209ENST00000540819 ZKSCAN2Q63HK3 967 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 PDXDC1Q6P996 788 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 RSRC2Q7L4I2 434 aaKnown RBP6.48□□□□□ -1.37
PRKDC-209ENST00000540819 DDX53Q86TM3 631 aaKnown RBP6.48□□□□□ -1.37
PRKDC-209ENST00000540819 RASSF3Q86WH2 238 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 SIAH1Q8IUQ4 282 aa6.48□□□□□ -1.37
PRKDC-209ENST00000540819 SMARCC1Q92922 1105 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms