RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 BRMS1Q9HCU9 246 aa14.84□□□□□ -0.03
CHFR-216ENST00000538235 STARD7Q9NQZ5 370 aa14.84□□□□□ -0.03
CHFR-216ENST00000538235 SLC9A2Q9UBY0 812 aa14.84□□□□□ -0.03
CHFR-216ENST00000538235 TET1Q8NFU7 2136 aa14.84□□□□□ -0.03
CHFR-216ENST00000538235 IGKV6D-21A0A0A0MT36 114 aa14.83□□□□□ -0.04
CHFR-216ENST00000538235 LGR5O75473 907 aa14.83□□□□□ -0.04
CHFR-216ENST00000538235 ATG7O95352 703 aa14.83□□□□□ -0.04
CHFR-216ENST00000538235 ITGB8P26012 769 aa14.83□□□□□ -0.04
CHFR-216ENST00000538235 ZNF174Q15697 407 aa14.83□□□□□ -0.04
CHFR-216ENST00000538235 NBPF20Q3BBV1 942 aa14.83□□□□□ -0.04
CHFR-216ENST00000538235 UTP14CQ5TAP6 766 aaKnown RBP14.83□□□□□ -0.04
CHFR-216ENST00000538235 ABHD15Q6UXT9 468 aa14.83□□□□□ -0.04
CHFR-216ENST00000538235 FAM126BQ8IXS8 530 aa14.83□□□□□ -0.04
CHFR-216ENST00000538235 PCSK9Q8NBP7 692 aaKnown RBP14.83□□□□□ -0.04
CHFR-216ENST00000538235 CDHR1Q96JP9 859 aa14.83□□□□□ -0.04
CHFR-216ENST00000538235 MTMR9Q96QG7 549 aa14.83□□□□□ -0.04
CHFR-216ENST00000538235 MTG1Q9BT17 334 aaPredicted RBP14.83□□□□□ -0.04
CHFR-216ENST00000538235 SPC25Q9HBM1 224 aa14.83□□□□□ -0.04
CHFR-216ENST00000538235 ZDHHC9Q9Y397 364 aa14.83□□□□□ -0.04
CHFR-216ENST00000538235 ELP1O95163 1332 aa14.83□□□□□ -0.04
CHFR-216ENST00000538235 MAFGO15525 162 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 MCM7P33993 719 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 PSEN2P49810 448 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 ZNF200P98182 395 aaPredicted RBP14.82□□□□□ -0.04
CHFR-216ENST00000538235 TLE2Q04725 743 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 ITGA7Q13683 1181 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 SAFBQ15424 915 aaKnown RBP eCLIP14.82□□□□□ -0.04
CHFR-216ENST00000538235 IL17AQ16552 155 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 DGKDQ16760 1214 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 TTC38Q5R3I4 469 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 LRCH2Q5VUJ6 765 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 MCTP1Q6DN14 999 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 C7orf61Q8IZ16 206 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 RNPEPQ9H4A4 650 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 PDLIM7Q9NR12 457 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 TRMT13Q9NUP7 481 aaKnown RBP14.82□□□□□ -0.04
CHFR-216ENST00000538235 POLR3EQ9NVU0 708 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 WRAP73Q9P2S5 460 aaPredicted RBP14.82□□□□□ -0.04
CHFR-216ENST00000538235 UMODL1Q5DID0 1318 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 EMSYQ7Z589 1322 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 IGSF9BQ9UPX0 1349 aa14.82□□□□□ -0.04
CHFR-216ENST00000538235 A0A0U1RQG5 324 aaPredicted RBP14.81□□□□□ -0.04
CHFR-216ENST00000538235 ARVCFO00192 962 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 CHMP2AO43633 222 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 ZNF862O60290 1169 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 B4GALT4O60513 344 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 CD4P01730 458 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 SUPT20HL2P0C7V6 817 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 GCFC2P16383 781 aaKnown RBP14.81□□□□□ -0.04
CHFR-216ENST00000538235 MARK3P27448 753 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 HOXC8P31273 242 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 DDIT3P35638 169 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 FAAP100Q0VG06 881 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 MFSD10Q14728 455 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 C1orf53Q5VUE5 145 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 FOXD4L5Q5VV16 416 aaPredicted RBP14.81□□□□□ -0.04
CHFR-216ENST00000538235 GDF6Q6KF10 455 aaPredicted RBP14.81□□□□□ -0.04
CHFR-216ENST00000538235 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
CHFR-216ENST00000538235 FOXD4L4Q8WXT5 416 aaPredicted RBP14.81□□□□□ -0.04
CHFR-216ENST00000538235 DHX38Q92620 1227 aaKnown RBP14.81□□□□□ -0.04
CHFR-216ENST00000538235 GLT1D1Q96MS3 346 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 TRPV6Q9H1D0 765 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.81□□□□□ -0.04
CHFR-216ENST00000538235 HDAC6Q9UBN7 1215 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 ATP11BQ9Y2G3 1177 aa14.81□□□□□ -0.04
CHFR-216ENST00000538235 TMEM150BA6NC51 233 aa14.8□□□□□ -0.04
CHFR-216ENST00000538235 TRIM43BA6NCK2 446 aa14.8□□□□□ -0.04
CHFR-216ENST00000538235 POTEMA6NI47 508 aa14.8□□□□□ -0.04
CHFR-216ENST00000538235 H3BQV1 296 aa14.8□□□□□ -0.04
CHFR-216ENST00000538235 NOP56O00567 594 aaKnown RBP14.8□□□□□ -0.04
CHFR-216ENST00000538235 STX6O43752 255 aa14.8□□□□□ -0.04
CHFR-216ENST00000538235 NEMFO60524 1076 aa14.8□□□□□ -0.04
CHFR-216ENST00000538235 PQBP1O60828 265 aaKnown RBP14.8□□□□□ -0.04
CHFR-216ENST00000538235 PPFIA4O75335 1185 aa14.8□□□□□ -0.04
CHFR-216ENST00000538235 STBD1O95210 358 aa14.8□□□□□ -0.04
CHFR-216ENST00000538235 KIAA0753Q2KHM9 967 aa14.8□□□□□ -0.04
CHFR-216ENST00000538235 SEPT1Q8WYJ6 367 aa14.8□□□□□ -0.04
CHFR-216ENST00000538235 TRIM43Q96BQ3 446 aaPredicted RBP14.8□□□□□ -0.04
CHFR-216ENST00000538235 RIT2Q99578 217 aa14.8□□□□□ -0.04
CHFR-216ENST00000538235 SDF4Q9BRK5 362 aa14.8□□□□□ -0.04
CHFR-216ENST00000538235 ZMYND8Q9ULU4 1186 aaPredicted RBP14.8□□□□□ -0.04
CHFR-216ENST00000538235 ZBTB42B2RXF5 422 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 H3BRB1 525 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 GAS7O60861 476 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 SYN1P17600 705 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 CAPN2P17655 700 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 CHMP4BP1P59074 171 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 ADAM17P78536 824 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 GRIN1Q05586 938 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 PPP2R5CQ13362 524 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 PLCB4Q15147 1175 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 ZNF746Q6NUN9 644 aaPredicted RBP14.79□□□□□ -0.04
CHFR-216ENST00000538235 ANKRD33Q7Z3H0 272 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 GIMAP8Q8ND71 665 aaPredicted RBP14.79□□□□□ -0.04
CHFR-216ENST00000538235 TRAPPC12Q8WVT3 735 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 VWCEQ96DN2 955 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 TEKT3Q9BXF9 490 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 TUT1Q9H6E5 874 aaKnown RBP14.79□□□□□ -0.04
CHFR-216ENST00000538235 TSHZ2Q9NRE2 1034 aa14.79□□□□□ -0.04
CHFR-216ENST00000538235 TBX21Q9UL17 535 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms