RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 SRP68Q9UHB9 627 aaKnown RBP14.7□□□□□ -0.06
HDAC4-214ENST00000535493 PVALEFA0A1B0GWK0 134 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 TTI1O43156 1089 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 RAD21O60216 631 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 CDK8P49336 464 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 CASP5P51878 434 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 MAGOHP61326 146 aaKnown RBP14.69□□□□□ -0.06
HDAC4-214ENST00000535493 E2F5Q15329 346 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 FAM26FQ5R3K3 315 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 GALNT17Q6IS24 598 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 PAXIP1Q6ZW49 1069 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-214ENST00000535493 KIRREL3Q8IZU9 778 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 ZKSCAN4Q969J2 545 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-214ENST00000535493 MAGOHBQ96A72 148 aaKnown RBP14.69□□□□□ -0.06
HDAC4-214ENST00000535493 IKZF4Q9H2S9 585 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 SLC40A1Q9NP59 571 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 HAUS2Q9NVX0 235 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 ANKIB1Q9P2G1 1089 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 KIAA1024Q9UPX6 916 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 PCDHGC5Q9Y5F6 944 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 GOLGA6L7A0A1B0GV03 622 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 H0YGN5 161 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 RBAK-RBAKDNI3L0D1 243 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 FGFR1OPO95684 399 aaKnown RBP14.69□□□□□ -0.06
HDAC4-214ENST00000535493 STAT3P40763 770 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 KCNH2Q12809 1159 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 ADAM9Q13443 819 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 METTL13Q8N6R0 699 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 SCLT1Q96NL6 688 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 NFS1Q9Y697 457 aa14.69□□□□□ -0.06
HDAC4-214ENST00000535493 MYH14Q7Z406 1995 aaKnown RBP14.68□□□□□ -0.06
HDAC4-214ENST00000535493 KRIT1O00522 736 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 SLC16A2P36021 539 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 HSPA9P38646 679 aaKnown RBP14.68□□□□□ -0.06
HDAC4-214ENST00000535493 TNNC1P63316 161 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 SF3B3Q15393 1217 aaKnown RBP14.68□□□□□ -0.06
HDAC4-214ENST00000535493 ASIC2Q16515 512 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 TMEM266Q2M3C6 531 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 CCDC121Q6ZUS5 278 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 UHMK1Q8TAS1 419 aaKnown RBP14.68□□□□□ -0.06
HDAC4-214ENST00000535493 WHAMMQ8TF30 809 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 SPAG5Q96R06 1193 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 VCPKMTQ9H867 229 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 POTEB3A0JP26 581 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 GMNCA6NCL1 334 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 HMGB1P1B2RPK0 211 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-214ENST00000535493 POTECB2RU33 542 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 KIF4AO95239 1232 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 SETQ01105 290 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-214ENST00000535493 PRPF4BQ13523 1007 aaKnown RBP14.68□□□□□ -0.06
HDAC4-214ENST00000535493 ZCWPW2Q504Y3 356 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 DCAF17Q5H9S7 520 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-214ENST00000535493 TCERG1LQ5VWI1 586 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 POTEBQ6S5H4 581 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 RUBCNQ92622 972 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 TRIM51Q9BSJ1 452 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 TSKSQ9UJT2 592 aa14.68□□□□□ -0.06
HDAC4-214ENST00000535493 AJAP1Q9UKB5 411 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-214ENST00000535493 NOC2LQ9Y3T9 749 aaKnown RBP14.68□□□□□ -0.06
HDAC4-214ENST00000535493 TULP1O00294 542 aaPredicted RBP14.67□□□□□ -0.06
HDAC4-214ENST00000535493 USP8P40818 1118 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 PPP1R2P41236 205 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 GSCP56915 257 aaPredicted RBP14.67□□□□□ -0.06
HDAC4-214ENST00000535493 MKRN4PQ13434 485 aaPredicted RBP14.67□□□□□ -0.06
HDAC4-214ENST00000535493 MICALCLQ6ZW33 695 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 MREGQ8N565 214 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 HAS1Q92839 578 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 ISCUQ9H1K1 167 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.67□□□□□ -0.06
HDAC4-214ENST00000535493 ATP8A1Q9Y2Q0 1164 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 LEMD3Q9Y2U8 911 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 MYH1P12882 1939 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 FRMD3A2A2Y4 597 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 MEIS1O00470 390 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 DHX9Q08211 1270 aaKnown RBP14.67□□□□□ -0.06
HDAC4-214ENST00000535493 KRT71Q3SY84 523 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 UBAP2Q5T6F2 1119 aaKnown RBP14.67□□□□□ -0.06
HDAC4-214ENST00000535493 RBM46Q8TBY0 533 aaKnown RBP14.67□□□□□ -0.06
HDAC4-214ENST00000535493 SCFD1Q8WVM8 642 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 RAPGEF5Q92565 580 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 SPZ1Q9BXG8 430 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 STK17AQ9UEE5 414 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 SLC12A6Q9UHW9 1150 aa14.67□□□□□ -0.06
HDAC4-214ENST00000535493 DCCP43146 1447 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 NFIXQ14938 502 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 TTBK2Q6IQ55 1244 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 TRIM59Q8IWR1 403 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 CD302Q8IX05 232 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 RNF14Q9UBS8 474 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 ZNF652Q9Y2D9 606 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 CASZ1Q86V15 1759 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 TLDC2A0PJX2 215 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 NR2F2P24468 414 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 NBPF9Q3BBW0 867 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 SPTY2D1Q68D10 685 aaPredicted RBP14.66□□□□□ -0.06
HDAC4-214ENST00000535493 ALKBH5Q6P6C2 394 aaKnown RBP14.66□□□□□ -0.06
HDAC4-214ENST00000535493 C6orf89Q6UWU4 347 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 IRF2BP2Q7Z5L9 587 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 MARCH10Q8NA82 808 aaPredicted RBP14.66□□□□□ -0.06
HDAC4-214ENST00000535493 IQCDQ96DY2 449 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms