RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 ASIC2Q16515 512 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 CEP85LQ5SZL2 805 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 HYIQ5T013 277 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 C10orf76Q5T2E6 689 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 FAM133AQ8N9E0 248 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 COA7Q96BR5 231 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 NFS1Q9Y697 457 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 ZNF335Q9H4Z2 1342 aaPredicted RBP12.63□□□□□ -0.39
PTPRK-217ENST00000524534 DDX60LQ5H9U9 1706 aaKnown RBP12.63□□□□□ -0.39
PTPRK-217ENST00000524534 FAM107AO95990 144 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 USP11P51784 963 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 SEC24CP53992 1094 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 CUL1Q13616 776 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 RPS6KA1Q15418 735 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 KLHL7Q8IXQ5 586 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 TAF4BQ92750 862 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 HAS1Q92839 578 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 PBKQ96KB5 322 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 NCAPGQ9BPX3 1015 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 KCTD10Q9H3F6 313 aa12.63□□□□□ -0.39
PTPRK-217ENST00000524534 COL16A1Q07092 1604 aaPredicted RBP12.63□□□□□ -0.39
PTPRK-217ENST00000524534 KCNK3O14649 394 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 KIF4AO95239 1232 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 ZBTB48P10074 688 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-217ENST00000524534 PDHBP11177 359 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 HSD17B3P37058 310 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 DPY19L2P1Q6NXN4 242 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 C6orf89Q6UWU4 347 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 MAATS1Q7Z4T9 603 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 ACTRT1Q8TDG2 376 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 SPATA31A1Q5TZJ5 1347 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 MYO1FO00160 1098 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 HDLBPQ00341 1268 aaKnown RBP12.62□□□□□ -0.39
PTPRK-217ENST00000524534 ARID5AQ03989 594 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 UAP1Q16222 522 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-217ENST00000524534 IRF2BP2Q7Z5L9 587 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 ARFGAP2Q8N6H7 521 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 LRRC57Q8N9N7 239 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 CABS1Q96KC9 395 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 CALR3Q96L12 384 aaKnown RBP12.62□□□□□ -0.39
PTPRK-217ENST00000524534 KANSL2Q9H9L4 492 aa12.62□□□□□ -0.39
PTPRK-217ENST00000524534 BMP2KQ9NSY1 1161 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-217ENST00000524534 THRAP3Q9Y2W1 955 aaKnown RBP12.62□□□□□ -0.39
PTPRK-217ENST00000524534 ATAD5Q96QE3 1844 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 BTDP43251 543 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 CLK2P49760 499 aaKnown RBP12.61□□□□□ -0.39
PTPRK-217ENST00000524534 MNAT1P51948 309 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 DDR1Q08345 913 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 NBPF5PQ86XG9 351 aaPredicted RBP12.61□□□□□ -0.39
PTPRK-217ENST00000524534 NELFCDQ8IXH7 590 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 CCDC65Q8IXS2 484 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 SCFD1Q8WVM8 642 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 LRRC45Q96CN5 670 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 SETDB2Q96T68 719 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 TBC1D7Q9P0N9 293 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 DDX25Q9UHL0 483 aaKnown RBP12.61□□□□□ -0.39
PTPRK-217ENST00000524534 GPR75-ASB3A0A0A6YYF3 556 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 GOLGA6L10A6NI86 522 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 GCOM1H8Y6P7 765 aaPredicted RBP12.61□□□□□ -0.39
PTPRK-217ENST00000524534 MYZAPP0CAP1 466 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 GSCP56915 257 aaPredicted RBP12.61□□□□□ -0.39
PTPRK-217ENST00000524534 PTK2Q05397 1052 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 KCNH2Q12809 1159 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 ADAM9Q13443 819 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 HLTFQ14527 1009 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTPRK-217ENST00000524534 PPP1R18Q6NYC8 613 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 ZNF571Q7Z3V5 609 aaPredicted RBP12.61□□□□□ -0.39
PTPRK-217ENST00000524534 C3orf20Q8ND61 904 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 NT5C3AQ9H0P0 336 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 SLC12A6Q9UHW9 1150 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 LEMD3Q9Y2U8 911 aa12.61□□□□□ -0.39
PTPRK-217ENST00000524534 FRMPD2Q68DX3 1309 aaPredicted RBP12.61□□□□□ -0.39
PTPRK-217ENST00000524534 E7EVH7 732 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 H0YHG0 523 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 KCNQ2O43526 872 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 SNHG28P0DPA3 235 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 TNNI2P48788 182 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 ACTN3Q08043 901 aaPredicted RBP12.6□□□□□ -0.39
PTPRK-217ENST00000524534 PLCB4Q15147 1175 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 ENOX2Q16206 610 aaKnown RBP12.6□□□□□ -0.39
PTPRK-217ENST00000524534 IFI16Q16666 785 aaKnown RBP12.6□□□□□ -0.39
PTPRK-217ENST00000524534 EDRF1Q3B7T1 1238 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 ASPRV1Q53RT3 343 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 PPP4R3CPQ6ZMV5 832 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 CCDC91Q7Z6B0 441 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 TEX11Q8IYF3 940 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 CCDC24Q8N4L8 307 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 VCPKMTQ9H867 229 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 EMILIN3Q9NT22 766 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 KDM3AQ9Y4C1 1321 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 BZW2Q9Y6E2 419 aaKnown RBP12.6□□□□□ -0.39
PTPRK-217ENST00000524534 ATP8B3O60423 1300 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 FRMD3A2A2Y4 597 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 E9PMD0 336 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 CEP104O60308 925 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 ZNF844Q08AG5 666 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 DRP2Q13474 957 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 BIRC3Q13489 604 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 SMIM5Q71RC9 77 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 CYFIP2Q96F07 1278 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms