RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 EPHA10Q5JZY3 1008 aa8.32□□□□□ -1.08
NR1I3-229ENST00000511748 CDC42EP5Q6NZY7 148 aa8.32□□□□□ -1.08
NR1I3-229ENST00000511748 GADL1Q6ZQY3 521 aa8.32□□□□□ -1.08
NR1I3-229ENST00000511748 VGLL2Q8N8G2 317 aa8.32□□□□□ -1.08
NR1I3-229ENST00000511748 EMILIN2Q9BXX0 1053 aa8.32□□□□□ -1.08
NR1I3-229ENST00000511748 RAD18Q9NS91 495 aa8.32□□□□□ -1.08
NR1I3-229ENST00000511748 TLR6Q9Y2C9 796 aa8.32□□□□□ -1.08
NR1I3-229ENST00000511748 DAGLAQ9Y4D2 1042 aa8.32□□□□□ -1.08
NR1I3-229ENST00000511748 ALPK3Q96L96 1907 aa8.32□□□□□ -1.08
NR1I3-229ENST00000511748 PTPRFP10586 1907 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 TMPRSS2O15393 492 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 LIG3P49916 1009 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 TCP10Q12799 353 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 DDX10Q13206 875 aaKnown RBP8.31□□□□□ -1.08
NR1I3-229ENST00000511748 SGO2Q562F6 1265 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 CDPF1Q6NVV7 123 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 LLGL2Q6P1M3 1020 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 ANKRD13CQ8N6S4 541 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 UTP4Q969X6 686 aaKnown RBP8.31□□□□□ -1.08
NR1I3-229ENST00000511748 GAL3ST3Q96A11 431 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 MYRFLQ96LU7 910 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 NOC4LQ9BVI4 516 aaKnown RBP8.31□□□□□ -1.08
NR1I3-229ENST00000511748 OSBPL5Q9H0X9 879 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-229ENST00000511748 USP40Q9NVE5 1235 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 DENND2AQ9ULE3 1009 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 HDAC5Q9UQL6 1122 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 ACTL7BQ9Y614 415 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 DOCK1Q14185 1865 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 ATRNL1Q5VV63 1379 aa8.31□□□□□ -1.08
NR1I3-229ENST00000511748 PDS5AQ29RF7 1337 aaKnown RBP8.3□□□□□ -1.08
NR1I3-229ENST00000511748 TTC28Q96AY4 2481 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 SART1O43290 800 aaKnown RBP8.3□□□□□ -1.08
NR1I3-229ENST00000511748 MSCO60682 206 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 RECKO95980 971 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 BMP3P12645 472 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 TFE3P19532 575 aaPredicted RBP8.3□□□□□ -1.08
NR1I3-229ENST00000511748 FGFR2P21802 821 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 CDK8P49336 464 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 NFIAQ12857 509 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 MAP3K21Q5TCX8 1036 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 SPTY2D1Q68D10 685 aaPredicted RBP8.3□□□□□ -1.08
NR1I3-229ENST00000511748 AGMOQ6ZNB7 445 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 PRR23CQ6ZRP0 262 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 MRRFQ96E11 262 aaKnown RBP8.3□□□□□ -1.08
NR1I3-229ENST00000511748 LBHD1Q9BQE6 289 aaPredicted RBP8.3□□□□□ -1.08
NR1I3-229ENST00000511748 PUS3Q9BZE2 481 aaKnown RBP8.3□□□□□ -1.08
NR1I3-229ENST00000511748 GSX1Q9H4S2 264 aaPredicted RBP8.3□□□□□ -1.08
NR1I3-229ENST00000511748 AS3MTQ9HBK9 375 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 COPRSQ9NQ92 184 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 CRIM1Q9NZV1 1036 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 ZMYND8Q9ULU4 1186 aaPredicted RBP8.3□□□□□ -1.08
NR1I3-229ENST00000511748 CYP8B1Q9UNU6 501 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 DOCK3Q8IZD9 2030 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 COL2A1P02458 1487 aaPredicted RBP8.3□□□□□ -1.08
NR1I3-229ENST00000511748 VCANP13611 3396 aa8.3□□□□□ -1.08
NR1I3-229ENST00000511748 DDX60LQ5H9U9 1706 aaKnown RBP8.29□□□□□ -1.08
NR1I3-229ENST00000511748 TRIM75PA6NK02 468 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 DYRK3O43781 588 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 MAPK4P31152 587 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 RGS3P49796 1198 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 SLC4A10Q6U841 1118 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.29□□□□□ -1.08
NR1I3-229ENST00000511748 Q7L0L9 218 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 DYMQ7RTS9 669 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 FAM20CQ8IXL6 584 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 PHC3Q8NDX5 983 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 DIS3LQ8TF46 1054 aaKnown RBP8.29□□□□□ -1.08
NR1I3-229ENST00000511748 SUCLG2Q96I99 432 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 BICC1Q9H694 974 aaKnown RBP8.29□□□□□ -1.08
NR1I3-229ENST00000511748 GINM1Q9NU53 330 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 FAM105AQ9NUU6 356 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 MORF4L1Q9UBU8 362 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 PRKAG2Q9UGJ0 569 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 AP4E1Q9UPM8 1137 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 SAMM50Q9Y512 469 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 GAKO14976 1311 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 PTPRCP08575 1304 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 SYNGAP1Q96PV0 1343 aa8.29□□□□□ -1.08
NR1I3-229ENST00000511748 LAMA2P24043 3122 aaKnown RBP8.28□□□□□ -1.08
NR1I3-229ENST00000511748 LOC285556D6RIA3 1793 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 RFX7Q2KHR2 1363 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 TMEM265A0A087WTH1 108 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 EYA2O00167 538 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 IGSF3O75054 1194 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 GLRX3O76003 335 aaKnown RBP8.28□□□□□ -1.08
NR1I3-229ENST00000511748 CIAO1O76071 339 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 NBPF7P0C2Y1 421 aaPredicted RBP8.28□□□□□ -1.08
NR1I3-229ENST00000511748 H2AFB1P0C5Y9 115 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 H2AFB2P0C5Z0 115 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 COL6A1P12109 1028 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 ZKSCAN1P17029 563 aaPredicted RBP8.28□□□□□ -1.08
NR1I3-229ENST00000511748 SEPT6Q14141 434 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 INPP5AQ14642 412 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 LRRC14Q15048 493 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 UVSSAQ2YD98 709 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 LRRC24Q50LG9 513 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 ZC3H12AQ5D1E8 599 aaKnown RBP8.28□□□□□ -1.08
NR1I3-229ENST00000511748 ERMP1Q7Z2K6 904 aa8.28□□□□□ -1.08
NR1I3-229ENST00000511748 DZIP1Q86YF9 867 aaKnown RBP8.28□□□□□ -1.08
NR1I3-229ENST00000511748 CCAR1Q8IX12 1150 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms