RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 MAP7D2Q96T17 732 aa5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 TUBGCP2Q9BSJ2 902 aa5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 DESI2Q9BSY9 194 aa5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 POLR3CQ9BUI4 534 aaPredicted RBP5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 WDR18Q9BV38 432 aa5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 ZNF341Q9BYN7 854 aa5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 GLIS2Q9BZE0 524 aaPredicted RBP5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 VPS16Q9H269 839 aa5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 EHMT1Q9H9B1 1298 aa5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 MRPL44Q9H9J2 332 aaKnown RBP5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 SLC39A2Q9NP94 309 aa5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 DNAI1Q9UI46 699 aa5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 KIAA1024Q9UPX6 916 aa5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 MRPL11Q9Y3B7 192 aaKnown RBP5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 PCDHA2Q9Y5H9 948 aa5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 CD2APQ9Y5K6 639 aa5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 ADGRG1Q9Y653 693 aa5.3□□□□□ -1.56
PDLIM5-214ENST00000510099 ZNF536O15090 1300 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 FRMPD4Q14CM0 1322 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 A0A1W2PQJ5 194 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 TTC26A0AVF1 554 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 RASSF10A6NK89 507 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 RNF225M0QZC1 329 aaPredicted RBP5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 FZD9O00144 591 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 PSMD10O75832 226 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 KIF20AO95235 890 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 SLU7O95391 586 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 FGFR1OPO95684 399 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 EGFRP00533 1210 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 ICAM1P05362 532 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 PRKCSHP14314 528 aaPredicted RBP5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 IDEP14735 1019 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 KRT9P35527 623 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 MTIF2P46199 727 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 GMPSP49915 693 aaPredicted RBP5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 HSD17B4P51659 736 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 RASSF7Q02833 373 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 PPP2R5CQ13362 524 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 ZYXQ15942 572 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 MAN2A1Q16706 1144 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 BMT2Q1RMZ1 405 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 CEP55Q53EZ4 464 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 CCDC174Q6PII3 467 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 B3GNT9Q6UX72 402 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 CYP26C1Q6V0L0 522 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 MIGA2Q7L4E1 593 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 CCDC84Q86UT8 332 aaPredicted RBP5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 LDHDQ86WU2 507 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 CATSPER3Q86XQ3 398 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 CCDC65Q8IXS2 484 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 MYOCDQ8IZQ8 938 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 GLIS3Q8NEA6 775 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 SLC5A5Q92911 643 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 CEP63Q96MT8 703 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 WDR24Q96S15 920 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 FEZ1Q99689 392 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 TSG101Q99816 390 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 SLF1Q9BQI6 1058 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 NOC4LQ9BVI4 516 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 FGFBP2Q9BYJ0 223 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 KIAA1683Q9H0B3 1180 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 PANK4Q9NVE7 773 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 FBXO28Q9NVF7 368 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 ZNF215Q9UL58 517 aaPredicted RBP5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 CAPN11Q9UMQ6 739 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 SIK3Q9Y2K2 1263 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 RABGAP1Q9Y3P9 1069 aa5.29□□□□□ -1.56
PDLIM5-214ENST00000510099 ASTN2O75129 1339 aaPredicted RBP5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 ZNF541Q9H0D2 1346 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 NPHP3-ACAD11A0A0J9YXS1 232 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 EML1O00423 815 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 MEIS1O00470 390 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 NKRFO15226 690 aaKnown RBP eCLIP5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 CTNND1O60716 968 aaKnown RBP5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 TADA3O75528 432 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 EYA4O95677 639 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 CFBP00751 764 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 SSBP05455 408 aaKnown RBP eCLIP5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 BCRP11274 1271 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 VCAM1P19320 739 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 MUTP22033 750 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 HNRNPH3P31942 346 aaKnown RBP5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 ZNF76P36508 570 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 ARHGAP25P42331 645 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 KLK7P49862 253 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 PRELPP51888 382 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 MARSP56192 900 aaKnown RBP5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 ZBED6P86452 979 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 RBM10P98175 930 aaKnown RBP5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 CDK17Q00537 523 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 TBC1D8BQ0IIM8 1120 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 GIT2Q14161 759 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 LRRC41Q15345 812 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 EDRF1Q3B7T1 1238 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 VWA3BQ502W6 1294 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 ARSHQ5FYA8 562 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 FKBP15Q5T1M5 1219 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 LRCH2Q5VUJ6 765 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 WDR59Q6PJI9 974 aa5.28□□□□□ -1.56
PDLIM5-214ENST00000510099 EPM2AIP1Q7L775 607 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms