RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 ATP6V1B1P15313 513 aa4.25□□□□□ -1.73
SUB1-202ENST00000502453 DESP17661 470 aa4.25□□□□□ -1.73
SUB1-202ENST00000502453 INPP5BP32019 993 aa4.25□□□□□ -1.73
SUB1-202ENST00000502453 KPNA1P52294 538 aaPredicted RBP4.25□□□□□ -1.73
SUB1-202ENST00000502453 SURF1Q15526 300 aa4.25□□□□□ -1.73
SUB1-202ENST00000502453 MEA1Q16626 185 aa4.25□□□□□ -1.73
SUB1-202ENST00000502453 HECTD3Q5T447 861 aa4.25□□□□□ -1.73
SUB1-202ENST00000502453 GALNTL5Q7Z4T8 443 aa4.25□□□□□ -1.73
SUB1-202ENST00000502453 SAPCD2Q86UD0 394 aa4.25□□□□□ -1.73
SUB1-202ENST00000502453 ZNF227Q86WZ6 799 aa4.25□□□□□ -1.73
SUB1-202ENST00000502453 UHMK1Q8TAS1 419 aaKnown RBP4.25□□□□□ -1.73
SUB1-202ENST00000502453 STON2Q8WXE9 905 aa4.25□□□□□ -1.73
SUB1-202ENST00000502453 ZNF396Q96N95 335 aaPredicted RBP4.25□□□□□ -1.73
SUB1-202ENST00000502453 SLF1Q9BQI6 1058 aa4.25□□□□□ -1.73
SUB1-202ENST00000502453 PA2G4Q9UQ80 394 aaKnown RBP4.25□□□□□ -1.73
SUB1-202ENST00000502453 RRP7AQ9Y3A4 280 aaKnown RBP4.25□□□□□ -1.73
SUB1-202ENST00000502453 CSTBP04080 98 aaKnown RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 CKMT1AP12532 417 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 MRE11P49959 708 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 DRG2P55039 364 aaKnown RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 GABREP78334 506 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 AP1B1Q10567 949 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 LRRFIP1Q32MZ4 808 aaKnown RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 UAP1L1Q3KQV9 507 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 AMOTQ4VCS5 1084 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 POTEAQ6S8J7 498 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 THSD4Q6ZMP0 1018 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 ANKK1Q8NFD2 765 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 ADCY4Q8NFM4 1077 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 CENPIQ92674 756 aaPredicted RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 MTRQ99707 1265 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 PCDHGB5Q9Y5G0 923 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 SPATA31D1Q6ZQQ2 1576 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 WDR64B1ANS9 1081 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 MAN1A2O60476 641 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 TADA3O75528 432 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 TECP42680 631 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 MCM2P49736 904 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 SH3BGRP55822 239 aaPredicted RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 LRRC32Q14392 662 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 METTL24Q5JXM2 366 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 PGBD2Q6P3X8 592 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 ABHD17CQ6PCB6 329 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 NLRC3Q7RTR2 1065 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 IGSF22Q8N9C0 903 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 NAT8LQ8N9F0 302 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 ACSF2Q96CM8 615 aaPredicted RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 TIGD1Q96MW7 591 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 TTLL2Q9BWV7 592 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 MS4A5Q9H3V2 200 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 ZWILCHQ9H900 591 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 TMEM39AQ9NV64 488 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 DACT1Q9NYF0 836 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 UTP6Q9NYH9 597 aaKnown RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 COQ6Q9Y2Z9 468 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 CFAP65Q6ZU64 1925 aaKnown RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 IL16Q14005 1332 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 LILRA1O75019 489 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 OSMP13725 252 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 VCAM1P19320 739 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 BTF3P20290 206 aaKnown RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 KCNJ6P48051 423 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 SF1Q15637 639 aaKnown RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 RNF220Q5VTB9 566 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 SLC30A6Q6NXT4 461 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 LLGL2Q6P1M3 1020 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 BTLAQ7Z6A9 289 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 CCDC84Q86UT8 332 aaPredicted RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 CCNJLQ8IV13 435 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 SLC30A5Q8TAD4 765 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 PMEPA1Q969W9 287 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 TMEM169Q96HH4 297 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 GAS2L1Q99501 681 aaPredicted RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 BAG1Q99933 345 aaPredicted RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 LZTS2Q9BRK4 669 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 DMRT3Q9NQL9 472 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 TLR7Q9NYK1 1049 aaKnown RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 STAP2Q9UGK3 403 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 DOK2O60496 412 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 ITGA6P23229 1130 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 STIP1P31948 543 aaKnown RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 GUCY1A3Q02108 690 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 RPL6Q02878 288 aaKnown RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 HSF5Q4G112 596 aaPredicted RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 DDX53Q86TM3 631 aaKnown RBP4.24□□□□□ -1.73
SUB1-202ENST00000502453 TMTC1Q8IUR5 882 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 SYTL1Q8IYJ3 562 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 ATG4CQ96DT6 458 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 REV1Q9UBZ9 1251 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 ARHGAP26Q9UNA1 814 aa4.24□□□□□ -1.73
SUB1-202ENST00000502453 FAM227AF5H4B4 570 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 EOMESO95936 686 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 S1PR4O95977 384 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 IL4RP24394 825 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 SEPHS1P49903 392 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 MLECQ14165 292 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 PRR16Q569H4 304 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 TRIM61Q5EBN2 209 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 SLC27A3Q5K4L6 730 aa4.23□□□□□ -1.73
SUB1-202ENST00000502453 BROXQ5VW32 411 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms