RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 UFL1O94874 794 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 SPDYE6P0CI01 402 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 CYP11B2P19099 503 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 STX17P56962 302 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 MYL5Q02045 173 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 SPDYE2Q495Y8 402 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 FILIP1LQ4L180 1135 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 ANKRD20A2Q5SQ80 823 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 ANKRD20A1Q5TYW2 823 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 ANKRD20A3Q5VUR7 823 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 MDM1Q8TC05 714 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 DDX12PQ92771 950 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 CLIP3Q96DZ5 547 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 SCYL1Q96KG9 808 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 HOOK1Q9UJC3 728 aaKnown RBP6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 BZW2Q9Y6E2 419 aaKnown RBP6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 PARP4Q9UKK3 1724 aaKnown RBP6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 MED23Q9ULK4 1368 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 GOLGA8AA7E2F4 631 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 POTEB2H3BUK9 544 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 SMIM22K7EJ46 135 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 SHBGP04278 402 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 SERPINB2P05120 415 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 ETS2P15036 469 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 STAT6P42226 847 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 GUCY2FP51841 1108 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 GRIN1Q05586 938 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 TOMM20Q15388 145 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 PABPC1LQ4VXU2 614 aaKnown RBP6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 RASGRP2Q7LDG7 609 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 IFNL3Q8IZI9 196 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 NSUN7Q8NE18 718 aaKnown RBP6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 LZTS2Q9BRK4 669 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 BRD8Q9H0E9 1235 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 SENP2Q9HC62 589 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 BCS1LQ9Y276 419 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 NFE2L3Q9Y4A8 694 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 DISP2A7MBM2 1401 aa6.34□□□□□ -1.39
SOX2-OT-218ENST00000498731 GPR75-ASB3A0A0A6YYF3 556 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 NPHP3-ACAD11A0A0J9YXS1 232 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 UBE2Q2LH0YL09 131 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 FAM107AO95990 144 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 S100BP04271 92 aaPredicted RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 GYPCP04921 128 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 MMP10P09238 476 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 SRGNP10124 158 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 FDPSP14324 419 aaKnown RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 PRDX5P30044 214 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 MDH1P40925 334 aaKnown RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 METAP2P50579 478 aaKnown RBP eCLIP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 MARSP56192 900 aaKnown RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 TRIM29Q14134 588 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 DUS1LQ6P1R4 473 aaKnown RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 TXNRD3Q86VQ6 643 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 SMYD4Q8IYR2 804 aaPredicted RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 LINC00301Q8NCQ3 95 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 NLGN2Q8NFZ4 835 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 CCDC43Q96MW1 224 aaKnown RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 AIFM3Q96NN9 605 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 SLC26A6Q9BXS9 759 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 SAP30BPQ9UHR5 308 aaKnown RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 ASB3Q9Y575 518 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 NR1D1P20393 614 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 DNAJA1P31689 397 aaKnown RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 CARSP49589 748 aaKnown RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 ALDH5A1P51649 535 aaPredicted RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 ITGB3BPQ13352 177 aaPredicted RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 PLCB4Q15147 1175 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 ACBD5Q5T8D3 534 aaPredicted RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 KIAA1328Q86T90 577 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 TBC1D10CQ8IV04 446 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 WDR75Q8IWA0 830 aaKnown RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 PHOX2BQ99453 314 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 LACRTQ9GZZ8 138 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 PTPRHQ9HD43 1115 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 CFAP45Q9UL16 551 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 PCDHA5Q9Y5H7 936 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 SLC12A7Q9Y666 1083 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 ABCC12Q96J65 1359 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 MYH2Q9UKX2 1941 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 MAGEB3O15480 346 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 CYP1A1P04798 512 aaPredicted RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 PDIA3P30101 505 aaKnown RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 CCNFP41002 786 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 SARSP49591 514 aaKnown RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 STK38Q15208 465 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 DIXDC1Q155Q3 683 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 WHAMMP3Q1A5X7 153 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 INF2Q27J81 1249 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 LRRC23Q53EV4 343 aaPredicted RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 FAM47AQ5JRC9 791 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 ZNF362Q5T0B9 420 aaPredicted RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 TMEM164Q5U3C3 297 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 OLFM4Q6UX06 510 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 CCNJLQ8IV13 435 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 STRBPQ96SI9 672 aaKnown RBP6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 INIPQ9NRY2 104 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 SWAP70Q9UH65 585 aa6.33□□□□□ -1.4
SOX2-OT-218ENST00000498731 TSKSQ9UJT2 592 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms