RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 PACSIN2Q9UNF0 486 aaPredicted RBP12.75□□□□□ -0.37
CDCA7-208ENST00000496441 BCS1LQ9Y276 419 aa12.75□□□□□ -0.37
CDCA7-208ENST00000496441 USO1O60763 962 aaKnown RBP12.74□□□□□ -0.37
CDCA7-208ENST00000496441 ERLIN1O75477 346 aa12.74□□□□□ -0.37
CDCA7-208ENST00000496441 MYBP10242 640 aa12.74□□□□□ -0.37
CDCA7-208ENST00000496441 EZH2Q15910 746 aaKnown RBP12.74□□□□□ -0.37
CDCA7-208ENST00000496441 KIAA1755Q5JYT7 1200 aa12.74□□□□□ -0.37
CDCA7-208ENST00000496441 FAM83BQ5T0W9 1011 aa12.74□□□□□ -0.37
CDCA7-208ENST00000496441 PPP1R18Q6NYC8 613 aa12.74□□□□□ -0.37
CDCA7-208ENST00000496441 TMEM179Q6ZVK1 233 aa12.74□□□□□ -0.37
CDCA7-208ENST00000496441 SH2D3AQ9BRG2 576 aa12.74□□□□□ -0.37
CDCA7-208ENST00000496441 REEP2Q9BRK0 252 aa12.74□□□□□ -0.37
CDCA7-208ENST00000496441 FOCADQ5VW36 1801 aa12.74□□□□□ -0.37
CDCA7-208ENST00000496441 GCFC2P16383 781 aaKnown RBP12.74□□□□□ -0.37
CDCA7-208ENST00000496441 PPP1R2P41236 205 aa12.74□□□□□ -0.37
CDCA7-208ENST00000496441 BRD3Q15059 726 aa12.74□□□□□ -0.37
CDCA7-208ENST00000496441 TBC1D10BQ4KMP7 808 aaPredicted RBP12.74□□□□□ -0.37
CDCA7-208ENST00000496441 CCDC170Q8IYT3 715 aa12.74□□□□□ -0.37
CDCA7-208ENST00000496441 AKT1S1Q96B36 256 aa12.74□□□□□ -0.37
CDCA7-208ENST00000496441 ADAMTS1Q9UHI8 967 aa12.74□□□□□ -0.37
CDCA7-208ENST00000496441 DNM3Q9UQ16 869 aa12.74□□□□□ -0.37
CDCA7-208ENST00000496441 EML1O00423 815 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 MSH4O15457 936 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 GCNT3O95395 438 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 LRRC27Q9C0I9 530 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 GOLPH3Q9H4A6 298 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 KCNMB3Q9NPA1 279 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 FBXO28Q9NVF7 368 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 NYAP2Q9P242 653 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 PRR12Q9ULL5 1215 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 ARFGEF1Q9Y6D6 1849 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 SLX4Q8IY92 1834 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 YDJCA8MPS7 323 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 ZBTB22O15209 634 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 POLD1P28340 1107 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 ORC2Q13416 577 aaPredicted RBP12.73□□□□□ -0.37
CDCA7-208ENST00000496441 CASP8Q14790 479 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 HDAC7Q8WUI4 952 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 DCAF4Q8WV16 495 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 RIN2Q8WYP3 895 aaPredicted RBP12.73□□□□□ -0.37
CDCA7-208ENST00000496441 MTMR8Q96EF0 704 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 MS4A14Q96JA4 679 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 KDM3AQ9Y4C1 1321 aa12.73□□□□□ -0.37
CDCA7-208ENST00000496441 LRRIQ3A6PVS8 624 aaPredicted RBP12.72□□□□□ -0.37
CDCA7-208ENST00000496441 SLC9A1P19634 815 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 LMAN1P49257 510 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 EHHADHQ08426 723 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 HDXQ7Z353 690 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 BAP1Q92560 729 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 RUSC1Q9BVN2 902 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 EHD4Q9H223 541 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 OPLAHO14841 1288 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 TACC1O75410 805 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 FTCDO95954 541 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 SPATA31C1P0DKV0 1188 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 MYBL2P10244 700 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 CASP4P49662 377 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 USP11P51784 963 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 KCNH2Q12809 1159 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 PSMD2Q13200 908 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 ZC2HC1CQ53FD0 456 aaPredicted RBP12.72□□□□□ -0.37
CDCA7-208ENST00000496441 CCDC181Q5TID7 509 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 HAUS3Q68CZ6 603 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 EHBP1Q8NDI1 1231 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 PACSIN1Q9BY11 444 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 GLIS2Q9BZE0 524 aaPredicted RBP12.72□□□□□ -0.37
CDCA7-208ENST00000496441 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.72□□□□□ -0.37
CDCA7-208ENST00000496441 ZNF277Q9NRM2 450 aaPredicted RBP12.72□□□□□ -0.37
CDCA7-208ENST00000496441 ZBTB21Q9ULJ3 1066 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 LTBP1Q14766 1721 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 TLR2O60603 784 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 SLC12A3P55017 1021 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 DGKZQ13574 1117 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 GIT2Q14161 759 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 SFMBT2Q5VUG0 894 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 SLFN12Q8IYM2 578 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 RDH13Q8NBN7 331 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 MSANTD4Q8NCY6 345 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 ETNPPLQ8TBG4 499 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 TMEM39BQ9GZU3 492 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 HOMER2Q9NSB8 354 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 L1RE1Q9UN81 338 aa12.72□□□□□ -0.37
CDCA7-208ENST00000496441 CETN3O15182 167 aa12.71□□□□□ -0.37
CDCA7-208ENST00000496441 NOL4O94818 638 aa12.71□□□□□ -0.37
CDCA7-208ENST00000496441 STAT2P52630 851 aa12.71□□□□□ -0.37
CDCA7-208ENST00000496441 ZCWPW2Q504Y3 356 aa12.71□□□□□ -0.37
CDCA7-208ENST00000496441 TATDN1Q6P1N9 297 aa12.71□□□□□ -0.37
CDCA7-208ENST00000496441 PDXDC1Q6P996 788 aa12.71□□□□□ -0.37
CDCA7-208ENST00000496441 GJB7Q6PEY0 223 aa12.71□□□□□ -0.37
CDCA7-208ENST00000496441 MKL1Q969V6 931 aa12.71□□□□□ -0.37
CDCA7-208ENST00000496441 LENG9Q96B70 501 aa12.71□□□□□ -0.37
CDCA7-208ENST00000496441 IDI2Q9BXS1 227 aa12.71□□□□□ -0.37
CDCA7-208ENST00000496441 SH2D4AQ9H788 454 aa12.71□□□□□ -0.37
CDCA7-208ENST00000496441 FAN1Q9Y2M0 1017 aa12.71□□□□□ -0.37
CDCA7-208ENST00000496441 COL11A2P13942 1736 aaPredicted RBP12.71□□□□□ -0.37
CDCA7-208ENST00000496441 A0A0U1RQG5 324 aaPredicted RBP12.71□□□□□ -0.38
CDCA7-208ENST00000496441 A0A1W2PQJ5 194 aa12.71□□□□□ -0.38
CDCA7-208ENST00000496441 NMT1P30419 496 aaKnown RBP12.71□□□□□ -0.38
CDCA7-208ENST00000496441 SPIRE1Q08AE8 756 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms