RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 A0A1W2PQY0 241 aa3.29□□□□□ -1.88
CDC42EP3-205ENST00000494083 PEX10O60683 326 aa3.29□□□□□ -1.88
CDC42EP3-205ENST00000494083 PPP1R11O60927 126 aaPredicted RBP3.29□□□□□ -1.88
CDC42EP3-205ENST00000494083 CALD1Q05682 793 aaKnown RBP3.29□□□□□ -1.88
CDC42EP3-205ENST00000494083 CYP4F3Q08477 520 aa3.29□□□□□ -1.88
CDC42EP3-205ENST00000494083 DDX10Q13206 875 aaKnown RBP3.29□□□□□ -1.88
CDC42EP3-205ENST00000494083 UTP14CQ5TAP6 766 aaKnown RBP3.29□□□□□ -1.88
CDC42EP3-205ENST00000494083 HEATR6Q6AI08 1181 aaKnown RBP3.29□□□□□ -1.88
CDC42EP3-205ENST00000494083 MRM1Q6IN84 353 aaKnown RBP3.29□□□□□ -1.88
CDC42EP3-205ENST00000494083 JAMLQ86YT9 394 aa3.29□□□□□ -1.88
CDC42EP3-205ENST00000494083 PTCHD1Q96NR3 888 aa3.29□□□□□ -1.88
CDC42EP3-205ENST00000494083 CRTAC1Q9NQ79 661 aa3.29□□□□□ -1.88
CDC42EP3-205ENST00000494083 WHRNQ9P202 907 aa3.29□□□□□ -1.88
CDC42EP3-205ENST00000494083 SIT1Q9Y3P8 196 aa3.29□□□□□ -1.88
CDC42EP3-205ENST00000494083 IRAK3Q9Y616 596 aa3.29□□□□□ -1.88
CDC42EP3-205ENST00000494083 NEO1Q92859 1461 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 NRXN2Q9P2S2 1712 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 MYH7BA7E2Y1 1941 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 N4BP3O15049 544 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 DBHP09172 617 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 PNLIPP16233 465 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 SLC7A5Q01650 507 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 SLC20A2Q08357 652 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 CPLX3Q8WVH0 158 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 SNX21Q969T3 373 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 PHAXQ9H814 394 aaKnown RBP3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 KCND1Q9NSA2 647 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 ACSL6Q9UKU0 697 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 KCTD3Q9Y597 815 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 PCDHA5Q9Y5H7 936 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 A0A0G2JLL6 359 aaPredicted RBP3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 ANP32CO43423 234 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 ATF4P18848 351 aaPredicted RBP3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 YBX1P67809 324 aaKnown RBP3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 SLFN5Q08AF3 891 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 SF1Q15637 639 aaKnown RBP3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 BICRALQ6AI39 1079 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 GALNT18Q6P9A2 607 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 LDHDQ86WU2 507 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 FAM129CQ86XR2 697 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 TMEFF1Q8IYR6 380 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 ZSCAN18Q8TBC5 510 aaPredicted RBP3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 MZB1Q8WU39 189 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 PPP1R14AQ96A00 147 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 CCSER2Q9H7U1 834 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 SALL3Q9BXA9 1300 aa3.28□□□□□ -1.88
CDC42EP3-205ENST00000494083 KCNH1O95259 989 aa3.28□□□□□ -1.89
CDC42EP3-205ENST00000494083 PRSS53Q2L4Q9 553 aa3.28□□□□□ -1.89
CDC42EP3-205ENST00000494083 HS1BP3Q53T59 392 aa3.28□□□□□ -1.89
CDC42EP3-205ENST00000494083 SMARCC1Q92922 1105 aaPredicted RBP3.28□□□□□ -1.89
CDC42EP3-205ENST00000494083 ANKRD36BQ8N2N9 1353 aa3.28□□□□□ -1.89
CDC42EP3-205ENST00000494083 PLEKHG2Q9H7P9 1386 aa3.28□□□□□ -1.89
CDC42EP3-205ENST00000494083 DOT1LQ8TEK3 1739 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 A0A1B0GTL3 188 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 WTIPA6NIX2 430 aaPredicted RBP3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 MPOP05164 745 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 ZDHHC14Q8IZN3 488 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 SIGLEC10Q96LC7 697 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 TGIF2Q9GZN2 237 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 PRR13Q9NZ81 148 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 FBXL7Q9UJT9 491 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 MYH3P11055 1940 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 LOC285556D6RIA3 1793 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 ARHGEF10O15013 1369 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 ZC3H12DA2A288 527 aaKnown RBP3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 IRS4O14654 1257 aaPredicted RBP3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 AURKAO14965 403 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 ETFBP38117 255 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 ARL4AP40617 200 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 TCEAL1Q15170 157 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 PLEKHF1Q96S99 279 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 ADAM7Q9H2U9 754 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 BTG4Q9NY30 223 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 CLEC1BQ9P126 229 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 ARNTLO00327 626 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 SMAD7O15105 426 aaKnown RBP3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 ZNF500O60304 480 aaPredicted RBP3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 BUB1BO60566 1050 aaPredicted RBP3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 ERCC5P28715 1186 aaPredicted RBP3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 POU4F1Q01851 419 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 SCRN1Q12765 414 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 LARP1BQ659C4 914 aaKnown RBP3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 CENPQQ7L2Z9 268 aaPredicted RBP3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 CCDC103Q8IW40 242 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 C19orf47Q8N9M1 422 aaKnown RBP3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 FEZF2Q8TBJ5 459 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 BACE2Q9Y5Z0 518 aa3.27□□□□□ -1.89
CDC42EP3-205ENST00000494083 NPATQ14207 1427 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 A0A1W2PQ27 194 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 A0A1W2PQ64 194 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 A0A1W2PQC6 194 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 A0A1W2PQD8 194 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 C2orf71A6NGG8 1288 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 PLA2G1BP04054 148 aaKnown RBP3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 FBLN1P23142 703 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 L1CAMP32004 1257 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 PRR5P85299 388 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 TEX2Q8IWB9 1127 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 ARHGEF39Q8N4T4 335 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 DACT3Q96B18 629 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms