RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 PTGDRQ13258 359 aa17.95■□□□□ 0.46
COPS3-210ENST00000492672 RILPL1Q5EBL4 403 aa17.95■□□□□ 0.46
COPS3-210ENST00000492672 B3GNT9Q6UX72 402 aa17.95■□□□□ 0.46
COPS3-210ENST00000492672 BRAPQ7Z569 592 aa17.95■□□□□ 0.46
COPS3-210ENST00000492672 PIAS4Q8N2W9 510 aaPredicted RBP17.95■□□□□ 0.46
COPS3-210ENST00000492672 C16orf70Q9BSU1 422 aa17.95■□□□□ 0.46
COPS3-210ENST00000492672 TBC1D22BQ9NU19 505 aa17.95■□□□□ 0.46
COPS3-210ENST00000492672 TFIP11Q9UBB9 837 aaKnown RBP17.95■□□□□ 0.46
COPS3-210ENST00000492672 VAV3Q9UKW4 847 aa17.95■□□□□ 0.46
COPS3-210ENST00000492672 NOP56O00567 594 aaKnown RBP17.94■□□□□ 0.46
COPS3-210ENST00000492672 GAS7O60861 476 aa17.94■□□□□ 0.46
COPS3-210ENST00000492672 HOXD8P13378 290 aaPredicted RBP17.94■□□□□ 0.46
COPS3-210ENST00000492672 TCF7P36402 384 aaPredicted RBP17.94■□□□□ 0.46
COPS3-210ENST00000492672 CPT1AP50416 773 aa17.94■□□□□ 0.46
COPS3-210ENST00000492672 ATN1P54259 1190 aaPredicted RBP17.94■□□□□ 0.46
COPS3-210ENST00000492672 CHMP4BP1P59074 171 aa17.94■□□□□ 0.46
COPS3-210ENST00000492672 ABHD15Q6UXT9 468 aa17.94■□□□□ 0.46
COPS3-210ENST00000492672 ANKLE1Q8NAG6 615 aa17.94■□□□□ 0.46
COPS3-210ENST00000492672 GIMAP8Q8ND71 665 aaPredicted RBP17.94■□□□□ 0.46
COPS3-210ENST00000492672 RIT2Q99578 217 aa17.94■□□□□ 0.46
COPS3-210ENST00000492672 NAP1L4Q99733 375 aaKnown RBP17.94■□□□□ 0.46
COPS3-210ENST00000492672 TSEN34Q9BSV6 310 aaKnown RBP17.94■□□□□ 0.46
COPS3-210ENST00000492672 TEKT3Q9BXF9 490 aa17.94■□□□□ 0.46
COPS3-210ENST00000492672 MARCH6O60337 910 aa17.93■□□□□ 0.46
COPS3-210ENST00000492672 PPFIA4O75335 1185 aa17.93■□□□□ 0.46
COPS3-210ENST00000492672 ATG7O95352 703 aa17.93■□□□□ 0.46
COPS3-210ENST00000492672 LGALS2P05162 132 aa17.93■□□□□ 0.46
COPS3-210ENST00000492672 SPIRE1Q08AE8 756 aa17.93■□□□□ 0.46
COPS3-210ENST00000492672 SF3A1Q15459 793 aaKnown RBP17.93■□□□□ 0.46
COPS3-210ENST00000492672 DGKDQ16760 1214 aa17.93■□□□□ 0.46
COPS3-210ENST00000492672 PCSK9Q8NBP7 692 aaKnown RBP17.93■□□□□ 0.46
COPS3-210ENST00000492672 SEPT1Q8WYJ6 367 aa17.93■□□□□ 0.46
COPS3-210ENST00000492672 FAM20AQ96MK3 541 aa17.93■□□□□ 0.46
COPS3-210ENST00000492672 USP28Q96RU2 1077 aa17.93■□□□□ 0.46
COPS3-210ENST00000492672 C11orf49Q9H6J7 331 aa17.93■□□□□ 0.46
COPS3-210ENST00000492672 DNAH12Q6ZR08 3092 aa17.92■□□□□ 0.46
COPS3-210ENST00000492672 TBX3O15119 743 aa17.92■□□□□ 0.46
COPS3-210ENST00000492672 HIC1Q14526 733 aa17.92■□□□□ 0.46
COPS3-210ENST00000492672 SWSAP1Q6NVH7 229 aa17.92■□□□□ 0.46
COPS3-210ENST00000492672 CCDC60Q8IWA6 550 aaPredicted RBP17.92■□□□□ 0.46
COPS3-210ENST00000492672 VTI1AQ96AJ9 217 aa17.92■□□□□ 0.46
COPS3-210ENST00000492672 MTG1Q9BT17 334 aaPredicted RBP17.92■□□□□ 0.46
COPS3-210ENST00000492672 ZSCAN16Q9H4T2 348 aaPredicted RBP17.92■□□□□ 0.46
COPS3-210ENST00000492672 TTC12Q9H892 705 aaPredicted RBP17.92■□□□□ 0.46
COPS3-210ENST00000492672 ELP1O95163 1332 aa17.92■□□□□ 0.46
COPS3-210ENST00000492672 MKI67P46013 3256 aaKnown RBP17.92■□□□□ 0.46
COPS3-210ENST00000492672 MOXD2PA6NHM9 499 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 POTEMA6NI47 508 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 OR52Z1P0C646 297 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 SUPT20HL2P0C7V6 817 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 ATP4AP20648 1035 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 TECP42680 631 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 PSEN2P49810 448 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 GRIN1Q05586 938 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 PTPAQ15257 358 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 UGCGQ16739 394 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 LRRC26Q2I0M4 334 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 NBPF20Q3BBV1 942 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 ZNF746Q6NUN9 644 aaPredicted RBP17.91■□□□□ 0.46
COPS3-210ENST00000492672 SLC39A5Q6ZMH5 540 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 NECAB2Q7Z6G3 386 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 RNPEPQ9H4A4 650 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 DISC1Q9NRI5 854 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 POLR3EQ9NVU0 708 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 PCDHA12Q9UN75 941 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 EVPLQ92817 2033 aa17.91■□□□□ 0.46
COPS3-210ENST00000492672 A0A087WWV3 80 aa17.9■□□□□ 0.46
COPS3-210ENST00000492672 IGKV6D-21A0A0A0MT36 114 aa17.9■□□□□ 0.46
COPS3-210ENST00000492672 HAS3O00219 553 aa17.9■□□□□ 0.46
COPS3-210ENST00000492672 ZEB2O60315 1214 aa17.9■□□□□ 0.46
COPS3-210ENST00000492672 LGR5O75473 907 aa17.9■□□□□ 0.46
COPS3-210ENST00000492672 BAG4O95429 457 aaKnown RBP17.9■□□□□ 0.46
COPS3-210ENST00000492672 MARK3P27448 753 aa17.9■□□□□ 0.46
COPS3-210ENST00000492672 ATP2C1P98194 919 aaPredicted RBP17.9■□□□□ 0.46
COPS3-210ENST00000492672 KRT76Q01546 638 aa17.9■□□□□ 0.46
COPS3-210ENST00000492672 PPP2R5CQ13362 524 aa17.9■□□□□ 0.46
COPS3-210ENST00000492672 BRDTQ58F21 947 aaPredicted RBP17.9■□□□□ 0.46
COPS3-210ENST00000492672 NCAPH2Q6IBW4 605 aa17.9■□□□□ 0.46
COPS3-210ENST00000492672 TRMT1LQ7Z2T5 733 aaKnown RBP17.9■□□□□ 0.46
COPS3-210ENST00000492672 MIER3Q7Z3K6 550 aa17.9■□□□□ 0.46
COPS3-210ENST00000492672 SLFN12Q8IYM2 578 aa17.9■□□□□ 0.46
COPS3-210ENST00000492672 STARD7Q9NQZ5 370 aa17.9■□□□□ 0.46
COPS3-210ENST00000492672 RGL1Q9NZL6 768 aa17.9■□□□□ 0.46
COPS3-210ENST00000492672 SAMM50Q9Y512 469 aa17.9■□□□□ 0.46
COPS3-210ENST00000492672 PCDHA10Q9Y5I2 948 aa17.9■□□□□ 0.46
COPS3-210ENST00000492672 PP2D1A8MPX8 630 aa17.89■□□□□ 0.45
COPS3-210ENST00000492672 H3BRB1 525 aa17.89■□□□□ 0.45
COPS3-210ENST00000492672 MARCKSP29966 332 aaPredicted RBP17.89■□□□□ 0.45
COPS3-210ENST00000492672 DNM1Q05193 864 aaKnown RBP17.89■□□□□ 0.45
COPS3-210ENST00000492672 ORC2Q13416 577 aaPredicted RBP17.89■□□□□ 0.45
COPS3-210ENST00000492672 ITGA7Q13683 1181 aa17.89■□□□□ 0.45
COPS3-210ENST00000492672 MFSD10Q14728 455 aa17.89■□□□□ 0.45
COPS3-210ENST00000492672 KIAA0753Q2KHM9 967 aa17.89■□□□□ 0.45
COPS3-210ENST00000492672 BANK1Q8NDB2 785 aa17.89■□□□□ 0.45
COPS3-210ENST00000492672 GLT1D1Q96MS3 346 aa17.89■□□□□ 0.45
COPS3-210ENST00000492672 TUT1Q9H6E5 874 aaKnown RBP17.89■□□□□ 0.45
COPS3-210ENST00000492672 WRAP73Q9P2S5 460 aaPredicted RBP17.89■□□□□ 0.45
COPS3-210ENST00000492672 GABBR1Q9UBS5 961 aa17.89■□□□□ 0.45
COPS3-210ENST00000492672 BACH1O14867 736 aa17.88■□□□□ 0.45
COPS3-210ENST00000492672 ZNF862O60290 1169 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms