RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 NR0B2Q15466 257 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 TMEM95Q3KNT9 176 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 ALDH1L2Q3SY69 923 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 LDLRAD1Q5T700 205 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 TAF3Q5VWG9 929 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 TTLL5Q6EMB2 1281 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 MYRIPQ8NFW9 859 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 PANK1Q8TE04 598 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 TSR2Q969E8 191 aaKnown RBP4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 INTS4Q96HW7 963 aaKnown RBP4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 PLEKHF1Q96S99 279 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 ZNF700Q9H0M5 742 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 SLC12A5Q9H2X9 1139 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 CXorf56Q9H5V9 222 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 PPCSQ9HAB8 311 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 UBP1Q9NZI7 540 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 ZNF69Q9UC07 566 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 ADAMTS1Q9UHI8 967 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 HDAC9Q9UKV0 1011 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 INTUQ9ULD6 942 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 YBX2Q9Y2T7 364 aaKnown RBP4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 ZNF281Q9Y2X9 895 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 PCDHB14Q9Y5E9 798 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 PCDHA11Q9Y5I1 949 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 SIGLEC1Q9BZZ2 1709 aa4.72□□□□□ -1.65
PRPF38B-205ENST00000485810 REREQ9P2R6 1566 aa4.71□□□□□ -1.65
PRPF38B-205ENST00000485810 DIP2CQ9Y2E4 1556 aa4.71□□□□□ -1.65
PRPF38B-205ENST00000485810 PTPRMP28827 1452 aa4.71□□□□□ -1.65
PRPF38B-205ENST00000485810 TEX51A0A1B0GUA7 166 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 SLC26A4O43511 780 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 GREM1O60565 184 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 SEMA7AO75326 666 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 CDC45O75419 566 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 MTA2O94776 668 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 POLR2BP30876 1174 aaKnown RBP4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 MVPQ14764 893 aaKnown RBP4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 GRAMD1BQ3KR37 738 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 SEZ6Q53EL9 994 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 ALFQ53S48 1182 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 ARSHQ5FYA8 562 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 C10orf62Q5T681 223 aaPredicted RBP4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 LARP1BQ659C4 914 aaKnown RBP4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 UBE2Q1Q7Z7E8 422 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 SKAP1Q86WV1 359 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 SMAP1Q8IYB5 467 aaPredicted RBP4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 SLFN12Q8IYM2 578 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 LILRA2Q8N149 483 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 GOLGA1Q92805 767 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 ERP27Q96DN0 273 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 CCDC74BQ96LY2 380 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 KREMEN1Q96MU8 473 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 PAIP2Q9BPZ3 127 aaKnown RBP4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 PNNQ9H307 717 aaKnown RBP4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 RWDD1Q9H446 243 aaPredicted RBP4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 ZCCHC4Q9H5U6 513 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 RBM28Q9NW13 759 aaKnown RBP4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 RAI14Q9P0K7 980 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 DUSP13Q9UII6 198 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 ACAD8Q9UKU7 415 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 THRAP3Q9Y2W1 955 aaKnown RBP4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 ANKRD26Q9UPS8 1709 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 ARHGEF40Q8TER5 1519 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 CD163L1Q9NR16 1453 aa4.71□□□□□ -1.66
PRPF38B-205ENST00000485810 PIK3R4Q99570 1358 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 SLC22A31A6NKX4 558 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 GOLGA6L22H0YM25 854 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 PSPNO60542 156 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 RBP3P10745 1247 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 GBP1P32455 592 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 MCM4P33991 863 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 RGS3P49796 1198 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 EXOSC10Q01780 885 aaKnown RBP4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 TEKQ02763 1124 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 CLCQ05315 142 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 CWF19L2Q2TBE0 894 aaKnown RBP4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 INO80DQ53TQ3 878 aaPredicted RBP4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 CCDC93Q567U6 631 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 GK5Q6ZS86 529 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 ANKRD13BQ86YJ7 626 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 IFNL3Q8IZI9 196 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 SLC39A13Q96H72 371 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 RNPC3Q96LT9 517 aaKnown RBP4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.7□□□□□ -1.662e-14■□□□□ 8.1
PRPF38B-205ENST00000485810 G6PC3Q9BUM1 346 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 SEZ6LQ9BYH1 1024 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 XYLT2Q9H1B5 865 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 SLC6A17Q9H1V8 727 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 ALDH8A1Q9H2A2 487 aaPredicted RBP4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 ANTXR1Q9H6X2 564 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 GPATCH2Q9NW75 528 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 EVLQ9UI08 416 aaPredicted RBP4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 DDX19BQ9UMR2 479 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 DIS3Q9Y2L1 958 aaKnown RBP4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 MRPS23Q9Y3D9 190 aaKnown RBP4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 KCTD3Q9Y597 815 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 TMEM131LA2VDJ0 1609 aa4.7□□□□□ -1.66
PRPF38B-205ENST00000485810 RICTORQ6R327 1708 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 A0A1W2PP64 1363 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 KIF16BQ96L93 1317 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 TSPAN6O43657 245 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms